Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8g12
         (634 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    26   0.26 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   2.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   2.5  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    23   2.5  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   2.5  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    23   2.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   5.7  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   5.7  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   5.7  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.9  

>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -1

Query: 292 RSAGVRSRNETSILLSMSEKKIARLQKINCQKFFSYHYRNN 170
           R+   RSR E  I+ S+S K I      N   + +Y+Y NN
Sbjct: 70  RTERERSR-EPKIISSLSNKTIHNNNNYNNNNYNNYNYNNN 109


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 545 YLPKYVSLILTFHTRIS 595
           ++ KYV +I   HTRIS
Sbjct: 318 HMQKYVQMIHDLHTRIS 334


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 545 YLPKYVSLILTFHTRIS 595
           ++ KYV +I   HTRIS
Sbjct: 318 HMQKYVQMIHDLHTRIS 334


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 441 GCWYDHQRFQAVSYDL 394
           GCW +HQ  Q  + D+
Sbjct: 329 GCWNEHQPLQRQNMDM 344


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -1

Query: 142 WNTSNANFH*IINLVNFLDILHQNIKYRLSILSY*SRTI 26
           W+     +  I NL+N  DIL +  + RL +L    R +
Sbjct: 268 WDLKYNTWEPISNLINCSDILEEFERNRLQLLESFKRKV 306


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 441 GCWYDHQRFQAVSYDL 394
           GCW +HQ  Q  + D+
Sbjct: 329 GCWNEHQPLQRENMDM 344


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/33 (21%), Positives = 18/33 (54%)
 Frame = -2

Query: 315 IIIFSLLFVVLVFDPEMKRQFCCQCQKRRLQDC 217
           + +  LL ++++    + R+   +C K++  DC
Sbjct: 539 VAVVVLLVIIIIMTVLILRRASDECNKKQPSDC 571



 Score = 21.4 bits (43), Expect = 7.5
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = -1

Query: 316 NNYFFTTFRSAGVRSRNETSILLSMSEKKIARLQKINCQKFFSYHY 179
           NN+ +T F   G  +R    I  +  +  +     ++C++ FS  Y
Sbjct: 70  NNWLWTPFIERGPANRMYIEIKFTTRDCSLFPGNALSCKETFSLLY 115


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -2

Query: 441 GCWYDHQRFQAVSYDL 394
           GCW +HQ  Q  + ++
Sbjct: 326 GCWNEHQSLQRQNLEM 341


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +2

Query: 254 N*RFISGSNTSTTKSSEKIII 316
           N +FI+ +N+S+T    K+II
Sbjct: 320 NFKFITDANSSSTPEQFKVII 340


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 579 NVSMSETYLGRYSSSCFDL 523
           + + SE +L RY + CF L
Sbjct: 728 STARSEQFLCRYEAHCFAL 746


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,175
Number of Sequences: 438
Number of extensions: 3865
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)