Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8g10
(659 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012116-1|AAH12116.1| 370|Homo sapiens LOC55565 protein protein. 41 0.003
AF070588-1|AAC28648.1| 370|Homo sapiens unknown protein. 41 0.003
AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein. 31 4.8
AL035406-9|CAI19891.1| 1954|Homo sapiens chromodomain helicase D... 30 8.4
AL031847-10|CAI19450.1| 1954|Homo sapiens chromodomain helicase ... 30 8.4
AK127046-1|BAC86802.1| 1225|Homo sapiens protein ( Homo sapiens ... 30 8.4
AF425231-1|AAL98962.1| 1954|Homo sapiens chromodomain helicase D... 30 8.4
>BC012116-1|AAH12116.1| 370|Homo sapiens LOC55565 protein protein.
Length = 370
Score = 41.1 bits (92), Expect = 0.003
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +3
Query: 378 QEMDPLSLLEPKARRRR--KGSGPKSETSEERAAR-LAKMSAYAAQRLANESPEQRATRL 548
++ +PL + + R R K S +ET EER R + A QR+ E+ EQRA RL
Sbjct: 220 RQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRM-QETDEQRARRL 278
Query: 549 KRMSEYAAKRLSSETREQRAIRLAR 623
+R E + ++ET E+R RL R
Sbjct: 279 QRDREAMRLKRANETPEKRQARLIR 303
Score = 40.7 bits (91), Expect = 0.005
Identities = 35/90 (38%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = +3
Query: 399 LLEPKARRRRKGS-GPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAK 575
LLE + RK + ++E E R RL + R NE+PE+R R RM + AK
Sbjct: 205 LLEAQTPSVRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVR--RMRDREAK 262
Query: 576 RLS--SETREQRAIRLARMSAYAARRLANE 659
RL ET EQRA RL R + ANE
Sbjct: 263 RLQRMQETDEQRARRLQRDREAMRLKRANE 292
Score = 34.3 bits (75), Expect = 0.39
Identities = 21/44 (47%), Positives = 26/44 (59%)
Frame = +3
Query: 450 ETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRL 581
ET E+RA RL + + ANE+PE+R RL R E AKRL
Sbjct: 269 ETDEQRARRLQRDREAMRLKRANETPEKRQARLIR--EREAKRL 310
>AF070588-1|AAC28648.1| 370|Homo sapiens unknown protein.
Length = 370
Score = 41.1 bits (92), Expect = 0.003
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +3
Query: 378 QEMDPLSLLEPKARRRR--KGSGPKSETSEERAAR-LAKMSAYAAQRLANESPEQRATRL 548
++ +PL + + R R K S +ET EER R + A QR+ E+ EQRA RL
Sbjct: 220 RQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRM-QETDEQRARRL 278
Query: 549 KRMSEYAAKRLSSETREQRAIRLAR 623
+R E + ++ET E+R RL R
Sbjct: 279 QRDREAMRLKRANETPEKRQARLIR 303
Score = 40.7 bits (91), Expect = 0.005
Identities = 35/90 (38%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = +3
Query: 399 LLEPKARRRRKGS-GPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAK 575
LLE + RK + ++E E R RL + R NE+PE+R R RM + AK
Sbjct: 205 LLEAQTPSVRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVR--RMRDREAK 262
Query: 576 RLS--SETREQRAIRLARMSAYAARRLANE 659
RL ET EQRA RL R + ANE
Sbjct: 263 RLQRMQETDEQRARRLQRDREAMRLKRANE 292
Score = 34.3 bits (75), Expect = 0.39
Identities = 21/44 (47%), Positives = 26/44 (59%)
Frame = +3
Query: 450 ETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRL 581
ET E+RA RL + + ANE+PE+R RL R E AKRL
Sbjct: 269 ETDEQRARRLQRDREAMRLKRANETPEKRQARLIR--EREAKRL 310
>AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein.
Length = 1943
Score = 30.7 bits (66), Expect = 4.8
Identities = 24/70 (34%), Positives = 33/70 (47%)
Frame = +3
Query: 405 EPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLS 584
E + RR ++ + +E RL + + Q+L E E+R LKR E KRL
Sbjct: 504 EQQLRREQEERREQRLKRQEEEERL-QQRLRSEQQLRREQEERREQLLKREEE---KRLE 559
Query: 585 SETREQRAIR 614
E REQR R
Sbjct: 560 QERREQRLKR 569
Score = 30.7 bits (66), Expect = 4.8
Identities = 23/70 (32%), Positives = 29/70 (41%)
Frame = +3
Query: 405 EPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLS 584
E + + R+ K E E R L + QRL E E+ RLKR E +
Sbjct: 555 EKRLEQERREQRLKREQEERRDQLLKREEERRQQRLKREQEERLEQRLKR--EEVERLEQ 612
Query: 585 SETREQRAIR 614
E REQR R
Sbjct: 613 EERREQRLKR 622
>AL035406-9|CAI19891.1| 1954|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 1954
Score = 29.9 bits (64), Expect = 8.4
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +3
Query: 357 VEPVDMIQEMDPLSLLEPKAR-RRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQ 533
VEPV + ++ P L E K + +R+K G E SE K + + N ++
Sbjct: 42 VEPVSLPKKKKPKKLKENKCKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPN---KK 98
Query: 534 RATRLKRMSEYAAKRLSSETRE 599
+ +LK E AKR + E
Sbjct: 99 KKKKLKDKKEKKAKRKKKDEDE 120
>AL031847-10|CAI19450.1| 1954|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 1954
Score = 29.9 bits (64), Expect = 8.4
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +3
Query: 357 VEPVDMIQEMDPLSLLEPKAR-RRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQ 533
VEPV + ++ P L E K + +R+K G E SE K + + N ++
Sbjct: 42 VEPVSLPKKKKPKKLKENKCKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPN---KK 98
Query: 534 RATRLKRMSEYAAKRLSSETRE 599
+ +LK E AKR + E
Sbjct: 99 KKKKLKDKKEKKAKRKKKDEDE 120
>AK127046-1|BAC86802.1| 1225|Homo sapiens protein ( Homo sapiens
cDNA FLJ45103 fis, clone BRAWH3032571, moderately
similar to Chromodomain helicase-DNA-binding protein 4.
).
Length = 1225
Score = 29.9 bits (64), Expect = 8.4
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +3
Query: 357 VEPVDMIQEMDPLSLLEPKAR-RRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQ 533
VEPV + ++ P L E K + +R+K G E SE K + + N ++
Sbjct: 42 VEPVSLPKKKKPKKLKENKCKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPN---KK 98
Query: 534 RATRLKRMSEYAAKRLSSETRE 599
+ +LK E AKR + E
Sbjct: 99 KKKKLKDKKEKKAKRKKKDEDE 120
>AF425231-1|AAL98962.1| 1954|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 1954
Score = 29.9 bits (64), Expect = 8.4
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +3
Query: 357 VEPVDMIQEMDPLSLLEPKAR-RRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQ 533
VEPV + ++ P L E K + +R+K G E SE K + + N ++
Sbjct: 42 VEPVSLPKKKKPKKLKENKCKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPN---KK 98
Query: 534 RATRLKRMSEYAAKRLSSETRE 599
+ +LK E AKR + E
Sbjct: 99 KKKKLKDKKEKKAKRKKKDEDE 120
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,612,030
Number of Sequences: 237096
Number of extensions: 1633238
Number of successful extensions: 3393
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3385
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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