Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8g10
(659 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical p... 41 9e-04
Z75551-3|CAA99936.2| 547|Caenorhabditis elegans Hypothetical pr... 39 0.003
AF016427-4|AAB65353.1| 774|Caenorhabditis elegans Hypothetical ... 32 0.41
AF063007-7|AAC16428.1| 659|Caenorhabditis elegans Hypothetical ... 31 0.96
AF039052-10|AAF98634.1| 536|Caenorhabditis elegans Hypothetical... 28 6.8
U00043-11|AAN65290.1| 641|Caenorhabditis elegans Hypothetical p... 27 8.9
U00043-10|AAC77505.1| 779|Caenorhabditis elegans Hypothetical p... 27 8.9
AF300704-1|AAG24400.1| 622|Caenorhabditis elegans incenp-like p... 27 8.9
AC025716-5|AAK39616.1| 622|Caenorhabditis elegans Incenp homolo... 27 8.9
>U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical
protein C05D11.13 protein.
Length = 270
Score = 40.7 bits (91), Expect = 9e-04
Identities = 27/86 (31%), Positives = 41/86 (47%)
Frame = +3
Query: 402 LEPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRL 581
L +A R+R ETSEE RLAK + Y +R + E+ E+ RLKR +E
Sbjct: 71 LSKEAHRKRLRRA--RETSEETHTRLAKAADYKRKRCSEETEEEYRERLKRQAERKKMER 128
Query: 582 SSETREQRAIRLARMSAYAARRLANE 659
E+ +Q R + + + + L E
Sbjct: 129 MQESEDQANNRRIKAAEHRRQYLQRE 154
Score = 39.1 bits (87), Expect = 0.003
Identities = 29/81 (35%), Positives = 41/81 (50%)
Frame = +3
Query: 414 ARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLSSET 593
A RRRK +ET EE R AK + + NE+PE+ R +R + + L +ET
Sbjct: 167 AERRRKSL--LAETPEEAELRRAKNAQRRRDAIKNETPEEAENRRQRDAARRRQYLQTET 224
Query: 594 REQRAIRLARMSAYAARRLAN 656
EQ++ AR AAR+ N
Sbjct: 225 SEQKS---ARKIQDAARKRQN 242
>Z75551-3|CAA99936.2| 547|Caenorhabditis elegans Hypothetical
protein W04D2.6b protein.
Length = 547
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Frame = +3
Query: 408 PKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLSS 587
P+A +R + S S +S E + ++ S+Y++ R + +P++ T +R S A S
Sbjct: 89 PEASKRSRRSRSSSNSSSESDSSSSRSSSYSS-RSRSRTPQRSRTSKRRRSNSHASEDSD 147
Query: 588 ETREQRAIR---LARMSAYAAR 644
+ RE+RA + L + AY AR
Sbjct: 148 DAREKRAFKQMMLDKKQAYLAR 169
>AF016427-4|AAB65353.1| 774|Caenorhabditis elegans Hypothetical
protein F32D1.3 protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 535 APLD*SVCPNMQLKDFHQRRENRERLGWQECLHMQPVDL 651
AP +V N+ L +FH + NR L +++ LH+ P L
Sbjct: 649 APESVTVLQNIALAEFHMQNYNRSLLFYRKALHLDPTHL 687
>AF063007-7|AAC16428.1| 659|Caenorhabditis elegans Hypothetical
protein R119.5 protein.
Length = 659
Score = 30.7 bits (66), Expect = 0.96
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +3
Query: 333 DEQETLNTVEPVDMIQEMDPLSLLEPKAR--RRRKGSGPKSETSEE-RAARLAKMSAYAA 503
+ QE+ +T + ++ +P +P + RRR+ PKSE++++ R + + Y
Sbjct: 543 EPQESPSTSTESQVSEDEEPCCSTDPASTTSRRRRIRSPKSESAKKPRKSSSPPLDDYLK 602
Query: 504 QRLANESPEQRATRLKR 554
+ ++ EQRA L++
Sbjct: 603 EMAVRQNHEQRAIHLRQ 619
>AF039052-10|AAF98634.1| 536|Caenorhabditis elegans Hypothetical
protein T22D1.1 protein.
Length = 536
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 218 IVCFSYNHFLPRTICLT*ITHTDYSM 141
I C+ +HFLP+ C + H +S+
Sbjct: 506 IGCYQVHHFLPQETCFLGVRHCSFSL 531
>U00043-11|AAN65290.1| 641|Caenorhabditis elegans Hypothetical
protein T26A5.2b protein.
Length = 641
Score = 27.5 bits (58), Expect = 8.9
Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Frame = +3
Query: 270 HFRLSDECIQYDNXXXXXXXXDEQETLNTVEPVDMIQEMDPLSLLEPKARRRRKGSGPKS 449
HF SD C N DE + D++ + P +A RR+G
Sbjct: 337 HFVESDHCYSLLNAKSVNGKPDETVVKSCPIDEDLVFSVFPFQ-CGRRAEERRRG---YQ 392
Query: 450 ETSEERAARLAKMSAYAAQRLANESPE----QRATRLKRMSEYAAKRLSSETREQ 602
E+ E + K + + E+PE ++ T L +Y A++L + +Q
Sbjct: 393 ESQREVQSSTKKPDVKVEKNVKLEAPEKQNKRKDTALNPKEKYCAQKLEKQLNDQ 447
>U00043-10|AAC77505.1| 779|Caenorhabditis elegans Hypothetical
protein T26A5.2a protein.
Length = 779
Score = 27.5 bits (58), Expect = 8.9
Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Frame = +3
Query: 270 HFRLSDECIQYDNXXXXXXXXDEQETLNTVEPVDMIQEMDPLSLLEPKARRRRKGSGPKS 449
HF SD C N DE + D++ + P +A RR+G
Sbjct: 475 HFVESDHCYSLLNAKSVNGKPDETVVKSCPIDEDLVFSVFPFQ-CGRRAEERRRG---YQ 530
Query: 450 ETSEERAARLAKMSAYAAQRLANESPE----QRATRLKRMSEYAAKRLSSETREQ 602
E+ E + K + + E+PE ++ T L +Y A++L + +Q
Sbjct: 531 ESQREVQSSTKKPDVKVEKNVKLEAPEKQNKRKDTALNPKEKYCAQKLEKQLNDQ 585
>AF300704-1|AAG24400.1| 622|Caenorhabditis elegans incenp-like
protein ICP-1 protein.
Length = 622
Score = 27.5 bits (58), Expect = 8.9
Identities = 28/97 (28%), Positives = 38/97 (39%), Gaps = 9/97 (9%)
Frame = +3
Query: 357 VEPVDMIQEMDPLSLLEPKARR-RRKGSGPKSETSE-ERAARLAKMSAYAAQRLANE--- 521
+EP+ P +PKA+ +R S TS E AA LA + +L E
Sbjct: 368 MEPMSCDDSTPPARQHKPKAKATKRSAHAASSSTSNVEAAAALAALQEQQRIQLEQEQYL 427
Query: 522 ----SPEQRATRLKRMSEYAAKRLSSETREQRAIRLA 620
E+R K M E A K RE++ LA
Sbjct: 428 LQLAEDERRKREQKEMKEKAEKERQLRAREEQEHFLA 464
>AC025716-5|AAK39616.1| 622|Caenorhabditis elegans Incenp homolog
protein 1 protein.
Length = 622
Score = 27.5 bits (58), Expect = 8.9
Identities = 28/97 (28%), Positives = 38/97 (39%), Gaps = 9/97 (9%)
Frame = +3
Query: 357 VEPVDMIQEMDPLSLLEPKARR-RRKGSGPKSETSE-ERAARLAKMSAYAAQRLANE--- 521
+EP+ P +PKA+ +R S TS E AA LA + +L E
Sbjct: 368 MEPMSCDDSTPPARQHKPKAKATKRSAHAASSSTSNVEAAAALAALQEQQRIQLEQEQYL 427
Query: 522 ----SPEQRATRLKRMSEYAAKRLSSETREQRAIRLA 620
E+R K M E A K RE++ LA
Sbjct: 428 LQLAEDERRKREQKEMKEKAEKERQLRAREEQEHFLA 464
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,933,785
Number of Sequences: 27780
Number of extensions: 270007
Number of successful extensions: 687
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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