Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8g07
         (229 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    20   1.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   2.2  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    20   2.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   2.8  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    19   5.0  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    19   5.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    19   5.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    19   6.6  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    19   6.6  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    19   6.6  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    19   8.7  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    19   8.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    19   8.7  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    19   8.7  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    19   8.7  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 19.8 bits (39), Expect(2) = 1.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 8   DCRPICGPASPLL 46
           D   +CGP +PL+
Sbjct: 375 DFHGLCGPKNPLI 387



 Score = 19.0 bits (37), Expect(2) = 1.8
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 77  CYPVNPCINI 106
           C P NP INI
Sbjct: 380 CGPKNPLINI 389


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -2

Query: 228 FFFISDKFTVHFTKQVCVSNHF*IH 154
           F++    FTVH    VC+   + +H
Sbjct: 241 FYYAFILFTVHLLLLVCIYYFYYMH 265


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.2 bits (40), Expect = 2.8
 Identities = 10/39 (25%), Positives = 16/39 (41%)
 Frame = -3

Query: 122 ECNSCIC*CKDLQDSTVVLVARCSGKGAEMQVHRSDDNP 6
           EC    C    ++   VV   +C+ K  E +  +  D P
Sbjct: 242 ECRLKKCLSVGMRPECVVPEVQCAVKRKEKKAQKEKDKP 280


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.2 bits (40), Expect = 2.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 40  APLPEQRATNTTVLSCK 90
           +P P+QR+ + T LS K
Sbjct: 696 SPSPQQRSPSVTDLSTK 712



 Score = 18.6 bits (36), Expect = 8.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 35  SPLLCQSSVPP 67
           SPL+  SS PP
Sbjct: 178 SPLISSSSSPP 188


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 19.4 bits (38), Expect = 5.0
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -1

Query: 211 QVYCTFYKTSVC 176
           Q  CTFY   +C
Sbjct: 242 QAVCTFYNILLC 253


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 19.4 bits (38), Expect = 5.0
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -1

Query: 211 QVYCTFYKTSVC 176
           Q  CTFY   +C
Sbjct: 242 QAVCTFYNILLC 253


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 19.4 bits (38), Expect = 5.0
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -1

Query: 211 QVYCTFYKTSVC 176
           Q  CTFY   +C
Sbjct: 562 QAVCTFYNILLC 573


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 19.0 bits (37), Expect = 6.6
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 139 WTISIVNLKMVRNTHLFCKMYSKLVANK 222
           W +   N++ + N  L C M S L+ ++
Sbjct: 158 WNMPRENIEPLPNVILACHMLSFLMVHQ 185


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 19.0 bits (37), Expect = 6.6
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = -3

Query: 227 FFLLATSLLYILQNKCVFLTIFKFTIEIVHC 135
           FF+    +LY++ + C  +T     I+   C
Sbjct: 147 FFVENEPILYLIFSYCPIVTTGIIKIQFATC 177


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 19.0 bits (37), Expect = 6.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 136 QWTISIVNLKMVRNT 180
           QW   I NLK+V  T
Sbjct: 91  QWAQLIQNLKVVATT 105


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 18.6 bits (36), Expect = 8.7
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +2

Query: 170 LETHTCFVKCTV 205
           + THT   KCT+
Sbjct: 1   IRTHTLPCKCTI 12


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 18.6 bits (36), Expect = 8.7
 Identities = 6/11 (54%), Positives = 6/11 (54%)
 Frame = +2

Query: 47  CQSSVPPTQRC 79
           CQ   P  QRC
Sbjct: 176 CQGGYPRLQRC 186


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 18.6 bits (36), Expect = 8.7
 Identities = 4/6 (66%), Positives = 5/6 (83%)
 Frame = -1

Query: 76   PLCWWH 59
            P CW+H
Sbjct: 1556 PACWYH 1561


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 18.6 bits (36), Expect = 8.7
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = +3

Query: 123 KLCNAMDDF 149
           K+CN +D+F
Sbjct: 218 KICNLIDEF 226


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 18.6 bits (36), Expect = 8.7
 Identities = 8/27 (29%), Positives = 10/27 (37%)
 Frame = +2

Query: 47  CQSSVPPTQRCYPVNPCINIYSCYTQI 127
           C SS P          C N Y  Y+ +
Sbjct: 236 CSSSQPVLSTTNSTTNCYNNYPYYSNM 262


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,265
Number of Sequences: 336
Number of extensions: 1167
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used:  3106741
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)