Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8g05
         (641 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   3.7  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    22   4.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.6  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 108 YNLYWCKVFEIYMTSINIV 52
           YNL W K   IY   I++V
Sbjct: 194 YNLVWIKEESIYEERISVV 212


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/30 (33%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 417 ASCRSCVKVLGPNK-ICHLELERCVHSWRD 503
           ASC   ++ L  ++ +CH+E+E   ++ RD
Sbjct: 165 ASCPMNLQYLPMDRQLCHIEIESFGYTMRD 194


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 128 FFPTDIRIIFIGVKFLKF 75
           FFP D  ++F   K L F
Sbjct: 700 FFPIDYSLVFSETKLLLF 717


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,396
Number of Sequences: 336
Number of extensions: 3060
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)