Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8g05
         (641 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0223 + 1901898-1901983,1902079-1902154,1902256-1902308,190...    33   0.19 
11_04_0297 + 16050333-16050348,16050564-16052518                       32   0.45 
05_03_0338 + 12652966-12653017,12653813-12653860,12653924-126540...    29   3.1  
10_08_0978 + 21994359-21996961,21997089-21998229                       28   5.5  
07_01_1027 - 8873582-8876275                                           28   5.5  
06_01_0832 - 6269249-6271794,6272083-6272176                           28   5.5  
04_04_0955 + 29640612-29643305                                         28   5.5  
01_05_0251 + 19952882-19955459,19956209-19956245,19956370-199565...    28   5.5  

>01_01_0223 +
           1901898-1901983,1902079-1902154,1902256-1902308,
           1902400-1902887,1902983-1903143,1903234-1903531,
           1903619-1903773
          Length = 438

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 13/53 (24%), Positives = 31/53 (58%)
 Frame = +1

Query: 313 ETIFVEPLQFIYINIEELSQKLLQNDYDGMILTSPRAVEAVSKCWDPTKFVIW 471
           E + V+ +Q +++ +E L ++++Q +    ++ SPR +E +S    P +  +W
Sbjct: 33  EALMVKQMQTLFVALEPLLRRVVQEELQAGLVRSPRYIERMSPETPPAQPPMW 85


>11_04_0297 + 16050333-16050348,16050564-16052518
          Length = 656

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 17/48 (35%), Positives = 29/48 (60%)
 Frame = +1

Query: 301 ENNFETIFVEPLQFIYINIEELSQKLLQNDYDGMILTSPRAVEAVSKC 444
           E+N    F+E L+++  N E++++ +L N     ILTSPR  + V +C
Sbjct: 82  ESNNRGNFLELLKWLAGNNEDVNKVVLNNAPGNCILTSPRIQKQVIRC 129


>05_03_0338 +
           12652966-12653017,12653813-12653860,12653924-12654080,
           12654104-12654206,12654866-12655111,12655802-12656204,
           12656257-12656354,12656460-12657044,12657120-12657566
          Length = 712

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = +1

Query: 235 EFSMMKIVLFKGESEDYQRIFRENNFETIFVEPLQFIYINIEELSQKLLQNDYDGMILTS 414
           +F+M +I  F+  SE +   F+EN+   IF EP        + L Q +  N Y   +L  
Sbjct: 235 QFNMTRIPQFEPRSEIFTNQFQENSRVRIFDEPRN------QYLGQHVDGNHYAEAVLKG 288

Query: 415 PR 420
           PR
Sbjct: 289 PR 290


>10_08_0978 + 21994359-21996961,21997089-21998229
          Length = 1247

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 322 FVEPLQFIYINIEELSQKLLQNDYDGMILTSPRAVEAVSKCW--DPTKFVIWNSKDVY 489
           F+E L  +  N EE+ + +L N      LT+P   + ++ C   + TK ++ +  D Y
Sbjct: 320 FLEMLSMLAENFEEVGKVVLNNAPKNCKLTAPEIQKQIANCCAKETTKLIMEDLGDEY 377


>07_01_1027 - 8873582-8876275
          Length = 897

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 322 FVEPLQFIYINIEELSQKLLQNDYDGMILTSPRAVEAVSKCW--DPTKFVIWNSKDVY 489
           F+E L  +  N EE+ + +L N      LT+P   + ++ C   + TK ++ +  D Y
Sbjct: 320 FLEMLSMLAENFEEVGKVVLNNAPKNCKLTAPEIQKQIANCCAKETTKLIMEDLGDEY 377


>06_01_0832 - 6269249-6271794,6272083-6272176
          Length = 879

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 322 FVEPLQFIYINIEELSQKLLQNDYDGMILTSPRAVEAVSKCW--DPTKFVIWNSKDVY 489
           F+E L  +  N EE+ + +L N      LT+P   + ++ C   + TK ++ +  D Y
Sbjct: 302 FLEMLSMLAENFEEVGKVVLNNAPKNCKLTAPEIQKQIANCCAKETTKLIMEDLGDEY 359


>04_04_0955 + 29640612-29643305
          Length = 897

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 322 FVEPLQFIYINIEELSQKLLQNDYDGMILTSPRAVEAVSKCW--DPTKFVIWNSKDVY 489
           F+E L  +  N EE+ + +L N      LT+P   + ++ C   + TK ++ +  D Y
Sbjct: 320 FLEMLSMLAENFEEVGKVVLNNAPKNCKLTAPEIQKQIANCCAKETTKLIMEDLGDEY 377


>01_05_0251 +
           19952882-19955459,19956209-19956245,19956370-19956586,
           19957063-19957221,19957397-19957516,19957609-19957719
          Length = 1073

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 322 FVEPLQFIYINIEELSQKLLQNDYDGMILTSPRAVEAVSKCW--DPTKFVIWNSKDVY 489
           F+E L  +  N EE+ + +L N      LT+P   + ++ C   + TK ++ +  D Y
Sbjct: 320 FLEMLSMLAENFEEVGKVVLNNAPKNCKLTAPEIQKQIANCCAKETTKLIMEDLGDEY 377


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,972,388
Number of Sequences: 37544
Number of extensions: 256837
Number of successful extensions: 600
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)