Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8g05
         (641 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82059-2|CAB04876.3|  557|Caenorhabditis elegans Hypothetical pr...    31   0.93 
Z69360-6|CAA93282.1|  599|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AL032653-1|CAA21714.1|  712|Caenorhabditis elegans Hypothetical ...    28   6.5  
Z68301-4|CAA92623.2|  536|Caenorhabditis elegans Hypothetical pr...    27   8.6  
U46753-9|AAA85765.1|  226|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z82059-2|CAB04876.3|  557|Caenorhabditis elegans Hypothetical
           protein T27E9.5 protein.
          Length = 557

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = +1

Query: 319 IFVEPLQF-IYINIEELSQKLLQNDYDGMILTSPRAVEAVSKCWDPTKFVIWNSKDVYTV 495
           I+V  LQF ++ + ++L + L   D +G+   S    E  S+CW+ +   IW+  D +  
Sbjct: 212 IYVIVLQFALFQSFDDLKKILTWLDSEGLGQKSLEEKEYASECWNLSPAKIWSHVDFFAF 271

Query: 496 GEMSSQKIK 522
              +   +K
Sbjct: 272 AHFTGWIMK 280


>Z69360-6|CAA93282.1|  599|Caenorhabditis elegans Hypothetical
           protein F25H8.6 protein.
          Length = 599

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
 Frame = +3

Query: 321 IRGATAVYLHKHRGVKSETTAKRLRWDD----IDQPASCRSCVK 440
           IRG T   L K  G  +  TAK  R+ D    I+Q A CR C K
Sbjct: 106 IRGTTEYPLRKRVGGSTVKTAKVWRYFDELPTIEQAAECRICRK 149


>AL032653-1|CAA21714.1|  712|Caenorhabditis elegans Hypothetical
           protein Y54E5B.1a protein.
          Length = 712

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = +3

Query: 411 QPASCRSCVKVLGPNKICHLELERCVH--SWR-DELSKNKI 524
           Q  SC  CV++  P+      + RCVH  SW  D+  +N +
Sbjct: 499 QQTSCSKCVQLQDPHCAWDSSIARCVHGGSWTGDQFIQNMV 539


>Z68301-4|CAA92623.2|  536|Caenorhabditis elegans Hypothetical
           protein W01B6.5 protein.
          Length = 536

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 366 KSETTAKRLRWDDIDQPASCRSCVKVLGPNKIC 464
           K+ET+ K+LR +D+      R  +   GP+K C
Sbjct: 61  KNETSGKKLRSNDVSPDVKDRLQLSEHGPSKTC 93


>U46753-9|AAA85765.1|  226|Caenorhabditis elegans Hypothetical
           protein C34F11.1 protein.
          Length = 226

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +3

Query: 351 KHRGVKSETTAKRLRWDDIDQPASCRSCVKVLGPNKICHLELERCVHSWRD 503
           +HRG   +T+   + ++    P  C  C+KV+G    C    ++CV  W D
Sbjct: 144 RHRGSALQTSECTICFEKPVDPRGCPKCLKVIG----C----KKCVKKWFD 186


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,478,163
Number of Sequences: 27780
Number of extensions: 273387
Number of successful extensions: 593
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)