Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8f24
         (470 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    23   1.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   1.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   2.5  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   3.3  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   4.3  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   7.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.6  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.6  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 273 FDKMLSDEMLSMKQQSHEKDM 335
           FD+ + D  + M +Q H+KD+
Sbjct: 60  FDQKVMDYFIKMVKQKHKKDI 80


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 147 RRVVISEDVSEMIPDFFFKHNSHRKLTTNYTNHRK-PNLKSNVFDKMLSDEMLSM 308
           ++V + ++  EMI    F+ + HR LT  Y +     N++ + F  ++  E + +
Sbjct: 69  KKVHLQDNTIEMIHRGTFQGDIHRDLTEVYFSFNSVRNVQQHTFADLIQLEQIHL 123


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +3

Query: 12  LHLNLLLCEFVMIFVFHILVFTIFLIEIHNF 104
           L L  + C F+ +F  + + +++    I NF
Sbjct: 141 LQLVFVFCYFIYLFTVYYIYYSVHEASIINF 171


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 336 TYSPSILTWNKASIPTPTLELKQKW 410
           T S +   W+ ASI + TLE  + W
Sbjct: 211 TNSANSSIWSPASIDSFTLEQHRSW 235


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +3

Query: 267 NVFDKMLSDEMLSMKQQSHEK 329
           N++D++LS+ +  MK+   +K
Sbjct: 290 NIYDRVLSELVNKMKEMKMDK 310


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 147 RRVVISEDVSEMIPDF 194
           RRV I ++  E+IP++
Sbjct: 355 RRVFIMDNCEELIPEY 370


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -3

Query: 192 NLESSPTHLQKLQLFEFHSRC*NVWSLVLKNCVSRL 85
           NLE    HLQK   F  ++   ++W       + RL
Sbjct: 405 NLECWAQHLQKTTTFMNYTDLHDLWGEFTLKALKRL 440


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 424 NSITGHFCFNS 392
           +S+T H CFNS
Sbjct: 56  SSVTLHVCFNS 66


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 15  HLNLLLCEFVMIFVFHILVFTIFLIEIHNF 104
           +++LL C   +IF  H+L    FL+ I+ F
Sbjct: 263 YMHLLFCCAFIIFTMHLL----FLLCIYYF 288


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,235
Number of Sequences: 336
Number of extensions: 2271
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10931752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)