Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8f23
         (579 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   0.81 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   3.3  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   3.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.3  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   4.3  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   7.6  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 24.2 bits (50), Expect = 0.81
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 408 DDDMEDFSSRDYGLKMSFLR 467
           DD+ME F   DY L   F R
Sbjct: 3   DDEMEKFEITDYDLNNEFYR 22


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -2

Query: 491 GNMHHLI*TKETHLQTIISAREIFHVIIKGLC*SLGI 381
           G++  LI T  TH   + SA + F +  K +   LG+
Sbjct: 262 GDLDELIVTLSTHYFPVFSACDYFTIETKTVLDVLGV 298


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 157 QDAAFALPISSVTNPVYTNPPVKTKFG 237
           Q AA  +  S +T+P    PP  T  G
Sbjct: 16  QSAATPISSSGMTSPAAAPPPATTSSG 42


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 6/23 (26%), Positives = 14/23 (60%)
 Frame = +3

Query: 477 MMHITIFLALIYFCNICIWYINE 545
           + ++T  + ++Y C++C   I E
Sbjct: 564 LSNVTFVIDVVYVCDVCYSTIEE 586


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 6/23 (26%), Positives = 14/23 (60%)
 Frame = +3

Query: 477 MMHITIFLALIYFCNICIWYINE 545
           + ++T  + ++Y C++C   I E
Sbjct: 289 LSNVTFVIDVVYVCDVCYSTIEE 311


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +3

Query: 513 FCNICIWYI 539
           + NIC WY+
Sbjct: 456 YTNICFWYV 464


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,601
Number of Sequences: 336
Number of extensions: 3173
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)