Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8f23
         (579 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117203-11|CAB55116.1|  126|Caenorhabditis elegans Hypothetical...   156   9e-39
AC024746-15|AAF60409.1|  168|Caenorhabditis elegans Hypothetical...    43   1e-04
U41556-4|AAY44020.2|  260|Caenorhabditis elegans Hypothetical pr...    30   1.4  
AL132949-38|CAB61092.3| 1099|Caenorhabditis elegans Hypothetical...    30   1.4  
U80954-5|AAB38096.1|  822|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AF100307-12|AAC68928.1|  338|Caenorhabditis elegans Hypothetical...    28   4.2  
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ...    27   7.3  
AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain, ...    27   7.3  
AC092690-3|AAK73857.1| 1145|Caenorhabditis elegans Hypothetical ...    27   7.3  
Z99277-6|CAB16484.1|  677|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>AL117203-11|CAB55116.1|  126|Caenorhabditis elegans Hypothetical
           protein Y48C3A.16 protein.
          Length = 126

 Score =  156 bits (379), Expect = 9e-39
 Identities = 71/88 (80%), Positives = 77/88 (87%)
 Frame = +1

Query: 4   LCEKQSKCLEALEKLKAGQKFPDVAAAYSEDKARQGGDLGWMTRGSMVGPFQDAAFALPI 183
           LCEKQ K LEA+EKLK+G KF +VAA YSEDKAR GGDLGWMTRGSMVGPFQDAAFAL  
Sbjct: 39  LCEKQGKALEAIEKLKSGMKFNEVAAQYSEDKARSGGDLGWMTRGSMVGPFQDAAFALSN 98

Query: 184 SSVTNPVYTNPPVKTKFGYHIIMVEGKK 267
           SS   P+YT+PPVKTKFGYH+IMVEGKK
Sbjct: 99  SSCDKPIYTDPPVKTKFGYHVIMVEGKK 126


>AC024746-15|AAF60409.1|  168|Caenorhabditis elegans Hypothetical
           protein Y110A2AL.13 protein.
          Length = 168

 Score = 43.2 bits (97), Expect = 1e-04
 Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = +1

Query: 61  KFPDVAAAYSE-DKARQGGDLGWMTRGSMVGPFQDAAFALPISSVTNPVYTNPPV 222
           KF ++A  +S+   A++GGDLG   R  M  PF+DA+FAL I  +++ V T+  V
Sbjct: 107 KFRELAKQFSDCSSAKRGGDLGPFERRQMQKPFEDASFALEIGEMSDIVDTSSGV 161


>U41556-4|AAY44020.2|  260|Caenorhabditis elegans Hypothetical
           protein C25B8.8 protein.
          Length = 260

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +3

Query: 360 KDLALLPDAQTSTQSFDDDMEDFSS-RDYGLKMSFLRLYQMMHITIFLALIYFCNICI 530
           +DL L  D  T   S D+  E F   R  G  +S      ++  TIFL L++ C ICI
Sbjct: 113 QDLMLTADKWTYDSSNDELPETFVYLRLSGQYLSACITVFLLFSTIFLQLLHLCGICI 170


>AL132949-38|CAB61092.3| 1099|Caenorhabditis elegans Hypothetical
           protein Y53F4B.21 protein.
          Length = 1099

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -3

Query: 388 WASGSRAKSLSNCSWRLHILSIINNKSIAQKYSNSKNISFISS 260
           W++      L+   WR H+L I++    +   S SKNIS I +
Sbjct: 465 WSTIEEGSFLARQQWRKHMLRILSEARKSYVSSKSKNISVIEA 507


>U80954-5|AAB38096.1|  822|Caenorhabditis elegans Hypothetical
           protein T07F8.1 protein.
          Length = 822

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +3

Query: 354 FDKDLALLPDAQTSTQSFDDDMEDFSSRDYGLKMSFLRLYQMMHIT 491
           F  DLA L  A  +    DDD+ DF+     LK +   L+  M +T
Sbjct: 707 FMNDLASLMSASNNAVFTDDDLNDFAKTLKNLKRNIRILHPSMGVT 752


>AF100307-12|AAC68928.1|  338|Caenorhabditis elegans Hypothetical
           protein T12B5.2 protein.
          Length = 338

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -3

Query: 172 QMQHLEMDQPLNLWSSSLDLHLALPCLHYK 83
           +++H E  + L +W S+ D  + + C H+K
Sbjct: 220 RLEHWENTEELKIWVSNFDSAIIVYCFHFK 249


>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
           unconventional myosinprotein 8, isoform a protein.
          Length = 1219

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +3

Query: 375 LPDAQTSTQSFDDDMEDFSSRDYGLKMSFLRLYQMMHI-TIFLALIYFCNI 524
           L D + +  S  DD  DF   +Y LK++ L   ++  I T   A+++  N+
Sbjct: 325 LSDPKFTQDSMVDDFSDFQRLEYALKLTGLSEQEIHFIWTTIAAILHLGNV 375


>AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain,
           unconventional myosinprotein 8, isoform b protein.
          Length = 1144

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +3

Query: 375 LPDAQTSTQSFDDDMEDFSSRDYGLKMSFLRLYQMMHI-TIFLALIYFCNI 524
           L D + +  S  DD  DF   +Y LK++ L   ++  I T   A+++  N+
Sbjct: 325 LSDPKFTQDSMVDDFSDFQRLEYALKLTGLSEQEIHFIWTTIAAILHLGNV 375


>AC092690-3|AAK73857.1| 1145|Caenorhabditis elegans Hypothetical
           protein BE0003N10.3 protein.
          Length = 1145

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 13/49 (26%), Positives = 20/49 (40%)
 Frame = -2

Query: 542 IYVPDANVTEIYQCQKYGNMHHLI*TKETHLQTIISAREIFHVIIKGLC 396
           I++ D  +     CQ Y N    I  K       ++  EI H +  G+C
Sbjct: 736 IFILDDGLGHFQNCQIYANQKFAIELKSAQANPTVTECEIHHGMSGGIC 784


>Z99277-6|CAB16484.1|  677|Caenorhabditis elegans Hypothetical
           protein Y53C12A.1 protein.
          Length = 677

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 188 DDIGKANAAS*NGPTIEPLVIQPRSPP 108
           DD  +A  +S N   IEP + +P SPP
Sbjct: 484 DDEEQATCSSSNSSAIEPQLDEPESPP 510


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,327,949
Number of Sequences: 27780
Number of extensions: 273558
Number of successful extensions: 668
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)