Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8f21
         (582 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    25   0.62 
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           25   0.62 
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   1.9  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   2.5  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   3.3  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   7.6  

>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +2

Query: 119 RPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSN 241
           R K+  A  A+NN  +      D  GEN +  + TR   S+
Sbjct: 318 RAKTQNATPANNNDKRKSRGEVDGLGENMMDMSLTRHQISS 358


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +2

Query: 119 RPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSN 241
           R K+  A  A+NN  +      D  GEN +  + TR   S+
Sbjct: 318 RAKTQNATPANNNDKRKSRGEVDGLGENMMDMSLTRHQISS 358


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 14/61 (22%), Positives = 30/61 (49%)
 Frame = +2

Query: 188 HAGENCVQKNKTRPNSSNEICSLNVSDDHESSASLATTKQRSTATLDKDVAASSSNIDLY 367
           ++GE  +Q+N+   NS ++  S  +     + +  +++   S ++     AASS    +Y
Sbjct: 165 NSGEGSLQENRYYNNSPDQYQSYQILLPTPTCSEASSSPTPSHSSESSFSAASSYTNTIY 224

Query: 368 H 370
           H
Sbjct: 225 H 225


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 5/18 (27%), Positives = 14/18 (77%)
 Frame = -3

Query: 250 TNLIGTVRTCLVLLYTIF 197
           T LIG ++ C+++++ ++
Sbjct: 249 TTLIGLIKNCVIVIFELY 266


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
 Frame = +2

Query: 272 HESSASLATTKQRSTATLDKDVAASSSNIDLYHYLRA------PENASVASSVTL---NG 424
           HE SA+ A   +    +L     ASS +   +H+L+A      P +ASVA++  L    G
Sbjct: 26  HEQSAAAAAAYRSFPLSLGMSPYASSQH--HHHHLQARPPQDSPYDASVAAACKLYSSEG 83

Query: 425 ESETNCKQN 451
           +  +N   N
Sbjct: 84  QQNSNYSSN 92


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 76  RHFTRNLYLFFLFIKSVLH 20
           R   +NLY   LF+ +VL+
Sbjct: 93  RKIRKNLYYLLLFVINVLY 111


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,818
Number of Sequences: 336
Number of extensions: 2800
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)