Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8f21
(582 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 42 7e-05
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 40 2e-04
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 32 0.070
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.50
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.65
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 28 0.87
SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protei... 28 0.87
SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces ... 28 1.1
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 28 1.1
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 28 1.1
SPCC4G3.10c |rhp42|rhp4b|DNA repair protein Rhp42|Schizosaccharo... 27 2.0
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 27 2.0
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 27 2.6
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 26 3.5
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 26 3.5
SPAC6G9.15c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 4.6
SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA syntheta... 25 6.1
SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyce... 25 6.1
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 6.1
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 25 6.1
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 6.1
SPBC428.08c |clr4||histone H3 methyltransferase Clr4|Schizosacch... 25 8.1
SPAC1805.01c |ppk6|SPAPJ736.02c|serine/threonine protein kinase ... 25 8.1
SPBC3H7.08c |||conserved fungal protein|Schizosaccharomyces pomb... 25 8.1
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 41.9 bits (94), Expect = 7e-05
Identities = 36/149 (24%), Positives = 72/149 (48%)
Frame = +2
Query: 98 SVQNDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHE 277
S ND+ S +S+ S S+ D E+ + + + +SS+ S + S+D++
Sbjct: 123 SEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSE-SESSSEDND 181
Query: 278 SSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTLNGESETNCKQNDS 457
SS+S + ++ S++ D D ++SSS+ + + S +SS + + ESE++ + NDS
Sbjct: 182 SSSSSSDSESESSSE-DSDSSSSSSDSE----SESSSEGSDSSSSSSSSESESSSEDNDS 236
Query: 458 LVSQHRIKVRSPKRCAPTIDDTEQAEGRS 544
S + S + + + +E S
Sbjct: 237 SSSSSDSESESSSEDSDSSSSSSDSESES 265
Score = 35.9 bits (79), Expect = 0.004
Identities = 24/124 (19%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Frame = +2
Query: 98 SVQNDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHE 277
S ++++ +S++ +S+S+ D + +++ +S + S N SD +
Sbjct: 222 SSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSED 281
Query: 278 SSASLATTKQRSTATLDKDVAASSSNIDLYHYLR-APENASVASSVTLNGESETNCKQND 454
S+S ++ + +++ D D +SSS+ D N +S ++ +S TN ++
Sbjct: 282 DSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSEDGNSNTDTTTSGEVSAQSSTNSTSSE 341
Query: 455 SLVS 466
S
Sbjct: 342 ESTS 345
Score = 35.1 bits (77), Expect = 0.008
Identities = 27/120 (22%), Positives = 63/120 (52%)
Frame = +2
Query: 98 SVQNDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHE 277
S ND+ S +S+ S S+ D E+ + + + +SS+ S + S+D++
Sbjct: 177 SEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSE-SESSSEDND 235
Query: 278 SSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTLNGESETNCKQNDS 457
SS+S + ++ S++ D D ++SSS+ + + +++S +S + S+++ +++S
Sbjct: 236 SSSSSSDSESESSSE-DSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESES 294
Score = 33.9 bits (74), Expect = 0.017
Identities = 28/105 (26%), Positives = 56/105 (53%)
Frame = +2
Query: 230 NSSNEICSLNVSDDHESSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASS 409
+SS+E S + S+D++SS+S + ++ S++ D D ++SSS+ + + S +SS
Sbjct: 114 SSSSE--SESSSEDNDSSSSSSDSESESSSE-DSDSSSSSSDSE----SESSSEGSDSSS 166
Query: 410 VTLNGESETNCKQNDSLVSQHRIKVRSPKRCAPTIDDTEQAEGRS 544
+ + ESE++ + NDS S + S + + + +E S
Sbjct: 167 SSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESES 211
Score = 33.9 bits (74), Expect = 0.017
Identities = 29/117 (24%), Positives = 61/117 (52%)
Frame = +2
Query: 107 NDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHESSA 286
+D+ S +S+ S S+ D E+ + + + +SS+ S + S+ +SS+
Sbjct: 162 SDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSE-SESSSEGSDSSS 220
Query: 287 SLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTLNGESETNCKQNDS 457
S ++++ S++ D D ++SSS+ + + S +SS + + ESE++ K +DS
Sbjct: 221 SSSSSESESSSE-DNDSSSSSSDSE----SESSSEDSDSSSSSSDSESESSSKDSDS 272
Score = 32.3 bits (70), Expect = 0.053
Identities = 29/140 (20%), Positives = 66/140 (47%)
Frame = +2
Query: 125 KSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHESSASLATTK 304
K+H + AS + S + + ++ +SS++ S + S+D +SS+S + ++
Sbjct: 95 KAHSSSEASGSGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSE 154
Query: 305 QRSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTLNGESETNCKQNDSLVSQHRIKV 484
S++ D ++SSS+ + + + +SS + + ESE++ + +DS S +
Sbjct: 155 SESSSE-GSDSSSSSSSSE----SESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSES 209
Query: 485 RSPKRCAPTIDDTEQAEGRS 544
S + + + +E S
Sbjct: 210 ESSSEGSDSSSSSSSSESES 229
Score = 30.7 bits (66), Expect = 0.16
Identities = 30/133 (22%), Positives = 65/133 (48%)
Frame = +2
Query: 146 ASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHESSASLATTKQRSTATL 325
+S+ S S+ D E+ + + + +SS+ S + S+ +SS+S ++++ S++
Sbjct: 121 SSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSE-SESSSEGSDSSSSSSSSESESSSE- 178
Query: 326 DKDVAASSSNIDLYHYLRAPENASVASSVTLNGESETNCKQNDSLVSQHRIKVRSPKRCA 505
D D ++SSS+ + + S +SS + + ESE++ + +DS S + S
Sbjct: 179 DNDSSSSSSDSE----SESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDN 234
Query: 506 PTIDDTEQAEGRS 544
+ + +E S
Sbjct: 235 DSSSSSSDSESES 247
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 40.3 bits (90), Expect = 2e-04
Identities = 28/82 (34%), Positives = 45/82 (54%)
Frame = +2
Query: 221 TRPNSSNEICSLNVSDDHESSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASV 400
T P SS+ I SL S +SS+S A+ S+ATL +AS ++ H L + ++ V
Sbjct: 72 TSPASSSFITSLVSSSSQQSSSSSASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLV 131
Query: 401 ASSVTLNGESETNCKQNDSLVS 466
ASS + +G S ++ + S+ S
Sbjct: 132 ASS-SSSGMSSSSLSHSSSVPS 152
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 31.9 bits (69), Expect = 0.070
Identities = 27/132 (20%), Positives = 61/132 (46%)
Frame = +2
Query: 164 KSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHESSASLATTKQRSTATLDKDVAA 343
++ S P +K+K + SS+E S + S + ESS+S + + + + + ++
Sbjct: 60 RASSPEPSKKSVKKQKKSKKKEESSSESESESSSSESESSSSESESSSSESESSSSESSS 119
Query: 344 SSSNIDLYHYLRAPENASVASSVTLNGESETNCKQNDSLVSQHRIKVRSPKRCAPTIDDT 523
S S ++ ++ E +S + + ESE ++ +++V K S + +
Sbjct: 120 SESEEEVI--VKTEEKKESSSESSSSSESE---EEEEAVVKIEEKKESSSDSSSESSSSE 174
Query: 524 EQAEGRSLDAEE 559
++E S ++EE
Sbjct: 175 SESESSSSESEE 186
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.1 bits (62), Expect = 0.50
Identities = 22/104 (21%), Positives = 48/104 (46%)
Frame = +2
Query: 233 SSNEICSLNVSDDHESSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASSV 412
+S+ I S +++ +S+SLA++ ST + +A+SS++ + ++S+ASS
Sbjct: 140 ASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSATSSSLASS- 198
Query: 413 TLNGESETNCKQNDSLVSQHRIKVRSPKRCAPTIDDTEQAEGRS 544
+LN + + + S + +++ T A S
Sbjct: 199 SLNSTTSATATSSSLSSTAASNSATSSSLASSSLNSTTSATATS 242
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 28.7 bits (61), Expect = 0.65
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = +2
Query: 146 ASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHESSASLATTKQRSTATL 325
+S++S S S+ + + + P SS+ S + S SS S T+ +S+++
Sbjct: 309 SSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSF 368
Query: 326 DKDVAASSS 352
V++SSS
Sbjct: 369 SSTVSSSSS 377
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 28.3 bits (60), Expect = 0.87
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 2/103 (1%)
Frame = +2
Query: 80 TRRRRFSVQNDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTR--PNSSNEICS 253
T R S +D S + ++S S + H E K P+SSNE
Sbjct: 21 TEVTRISNSSDHFEDSSSNVDESLDSSNPSSNEKASHTNEEYRSKGNQSYVPSSSNE--- 77
Query: 254 LNVSDDHESSASLATTKQRSTATLDKDVAASSSNIDLYHYLRA 382
S + S++ +++ S L D N +L HYLRA
Sbjct: 78 --PSPESSSNSDSSSSDDSSVDRLAGDPFELGENFNLKHYLRA 118
>SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protein
Tgc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 28.3 bits (60), Expect = 0.87
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 209 QKNKTRPNSSNEICSLNVSDDHESSASLATTKQRSTAT 322
+KN+ P ++E NVSD E AS ++++S T
Sbjct: 305 EKNENEPIEASESAPTNVSDSTEPKASEVDSEEKSGVT 342
>SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1888
Score = 27.9 bits (59), Expect = 1.1
Identities = 23/73 (31%), Positives = 36/73 (49%)
Frame = +2
Query: 263 SDDHESSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTLNGESETNC 442
SDD ES+ +K+ + T D D+A SS+ I+ + E S ++ + +S TN
Sbjct: 197 SDDDESNTEQDHSKESNLNTADNDLALSST-IEGKKTSTSKEALESESLLSDSDQSMTNI 255
Query: 443 KQNDSLVSQHRIK 481
N S VS +K
Sbjct: 256 SSN-STVSDLNLK 267
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 27.9 bits (59), Expect = 1.1
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = +2
Query: 113 TQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHESSASL 292
T+RP++HR S S SK+ P+ + +K S E + S + E S S
Sbjct: 493 TERPETHRTLSYSRLSELSKTFSPEIREPSLTKKTAVSMQESKEEGRSDESSESEESGSS 552
Query: 293 ATTKQRS 313
+ S
Sbjct: 553 SDESDNS 559
>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 517
Score = 27.9 bits (59), Expect = 1.1
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 4/134 (2%)
Frame = +2
Query: 101 VQNDTQRPKSHRARGASNNSYKSKSALPDH--AGENCVQKNKTRPNSSNEICSLNVSDDH 274
V ND +P + + +S NS K LP + +N +PN+ + L D H
Sbjct: 228 VSNDASQPSN---QDSSLNSNIVKPPLPPSNVQSNSSSSENVPKPNAETQE-DLPTIDAH 283
Query: 275 ESSASLATTKQRS-TATLDKDVAASSSNIDLYH-YLRAPENASVASSVTLNGESETNCKQ 448
ESS R +++A ++ D YLR ++ +S+ + E + Q
Sbjct: 284 ESSLYENVNDSRLYEVPACRNMALNTGYSDADPGYLRTSFRSNSHNSLPYSANEEEDVLQ 343
Query: 449 NDSLVSQHRIKVRS 490
D LVSQ V S
Sbjct: 344 ADFLVSQQSSMVSS 357
>SPCC4G3.10c |rhp42|rhp4b|DNA repair protein
Rhp42|Schizosaccharomyces pombe|chr 3|||Manual
Length = 686
Score = 27.1 bits (57), Expect = 2.0
Identities = 23/110 (20%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Frame = +2
Query: 98 SVQNDTQRPKSHRARGASNNSYKSKSALPDHAGEN--CVQKNKTRPNSSNEICSLNVSDD 271
S N QR S +G+ ++ K S+ D ++ ++ PN + L++
Sbjct: 68 SALNSLQRSASSSEKGSDEDNEKLGSSEDDEFDDDFDTWEQVDLSPNKQEDKKDLHIVTQ 127
Query: 272 HESSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTLN 421
H + +K+ S++ +DK + S I + H+ + SV + +N
Sbjct: 128 HITPQLTKESKKGSSSAMDKSIRLS---IHIMHFTCLLYHGSVRNRWLMN 174
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 27.1 bits (57), Expect = 2.0
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = -3
Query: 259 IQRTNLIGTVRTCLVLLYTIFSGMVGERGLRFVAVIGGAPRSVRLRS 119
+ R ++ R + Y + ++ L+ V V GGAP+S + R+
Sbjct: 236 VPRVLVVSPTRELAIQTYENLNSLIQGTNLKAVVVYGGAPKSEQARA 282
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 26.6 bits (56), Expect = 2.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 146 ASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLN 259
++NN A D EN V+K++TRP+ + S N
Sbjct: 520 SANNDVHEPVARQDPFNENEVEKSRTRPSQESYTTSSN 557
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 26.2 bits (55), Expect = 3.5
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +2
Query: 113 TQRPKSHRARGASNNSYKSKSALPDHAGENCVQKN---KTRPNSSNEICSLNVSDDHESS 283
+ RP R+R N Y+S H+ N +KN K R S+++ S + ++E
Sbjct: 557 SSRPSDSRSRSKFGNDYQS------HSKHNLFRKNSFPKRRRLSNSDTPSETTTPNNEQE 610
Query: 284 ASLATTKQRSTATLDKDVAASSSNIDLYHYLRA 382
+ Q + L+K ++A+ +++ + L+A
Sbjct: 611 ---QVSNQANKVDLNKIISAAMESVNQKNVLKA 640
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 26.2 bits (55), Expect = 3.5
Identities = 30/143 (20%), Positives = 56/143 (39%), Gaps = 7/143 (4%)
Frame = +2
Query: 128 SHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHESSASLATTKQ 307
S G+SN K ++ P + +K +T + + S +VSD E S
Sbjct: 350 SEEQMGSSNAKSKVLTSEPKDSTSVEAEKTETDEPAVGKGAS-DVSDTAEISEKTEAKNA 408
Query: 308 RSTATLDK--DVAASSSNID-----LYHYLRAPENASVASSVTLNGESETNCKQNDSLVS 466
S A L++ DV + D H ++ + + T E++ K+ DS+ +
Sbjct: 409 DSEANLEEKSDVGEEKESKDENNKASLHKDVEEKDTKITNEDTGKTETDVKAKETDSIEA 468
Query: 467 QHRIKVRSPKRCAPTIDDTEQAE 535
+ + K +++TE E
Sbjct: 469 NDKDEKTDSKETEDKVEETESKE 491
>SPAC6G9.15c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 498
Score = 25.8 bits (54), Expect = 4.6
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +2
Query: 338 AASSSNIDLYHYLRAPENASVASSVTLNGESETNCKQ--NDSLVSQHRIKVRS 490
A+++S+I+ EN++V + +LNG + +N K+ N +L R+KV++
Sbjct: 176 ASTNSSINNMVSTVNSENSNVNNGSSLNGNTSSNLKRKANVTLGDYKRLKVKN 228
>SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA synthetases
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 450
Score = 25.4 bits (53), Expect = 6.1
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +2
Query: 284 ASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTLNG 424
A+L RS + ASS + + ++ PENA + +T G
Sbjct: 339 ANLKPVNMRSVKSQAMVFCASSPDKSVVEFVLPPENAEIGDRLTFEG 385
>SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 481
Score = 25.4 bits (53), Expect = 6.1
Identities = 20/89 (22%), Positives = 31/89 (34%)
Frame = +2
Query: 242 EICSLNVSDDHESSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTLN 421
E+ SD+H A TATL++ A + Y AP A ++
Sbjct: 265 EVIQFTKSDEHAKLAKPTNLADLQTATLEQKSAMFTMPDQNYTIEEAPPTAEPWEPISAP 324
Query: 422 GESETNCKQNDSLVSQHRIKVRSPKRCAP 508
+ E SL S + + S +P
Sbjct: 325 KKQEFGVSLPPSLASPEKGGISSTTSVSP 353
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 25.4 bits (53), Expect = 6.1
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 215 NKTRPNSSNEICSLNVSDDHESSASLATTKQRSTATLDKDVAASSSNID 361
N+T +SN LN ++++++ +L + K S+ D SSSNID
Sbjct: 309 NRTSFLNSNNNLKLNEAEENQNLLNLRSPK--SSGKADNLTIKSSSNID 355
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 25.4 bits (53), Expect = 6.1
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 221 TRPNSSNEICSLNVSDDHESSASLATTKQRSTATLDKDVAASSSN 355
T P+SS+ S + S SS+S +++ S+++ ++SSS+
Sbjct: 153 TSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 197
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.4 bits (53), Expect = 6.1
Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 6/119 (5%)
Frame = +2
Query: 101 VQNDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNV-SDDHE 277
+ + + R S + N S+ + + + + + +SN I SLN+ S
Sbjct: 796 LSSSSSRTISTSSTNEYNTSFHAPTVSSTTSSSSTTSLAANKGVNSNSITSLNLESTSSV 855
Query: 278 SSASLATTKQRSTATL-----DKDVAASSSNIDLYHYLRAPENASVASSVTLNGESETN 439
+S + T ST L V +SS + P +SVA +VT G SET+
Sbjct: 856 TSTAYTTDSVTSTTALTSQGPSSSVVSSSLSSTTSLSTSIPVTSSVAPAVTSTG-SETS 913
>SPBC428.08c |clr4||histone H3 methyltransferase
Clr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 25.0 bits (52), Expect = 8.1
Identities = 16/66 (24%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +2
Query: 125 KSHRARGASNNS---YKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHESSASLA 295
+ R +G++++S + + + P+ ++ Q +K+ P S LNV +++ S
Sbjct: 60 RKRRLKGSNSDSDSPHHASNPHPNSRQKHQHQTSKSVPRSQRFSRELNVKKENKKVFSSQ 119
Query: 296 TTKQRS 313
TTK++S
Sbjct: 120 TTKRQS 125
>SPAC1805.01c |ppk6|SPAPJ736.02c|serine/threonine protein kinase
Ppk6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 25.0 bits (52), Expect = 8.1
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = +2
Query: 326 DKDVAASSSNIDLYHYLRAPENASVASSVTLNGESE 433
DKD+ I + H+L+A + ++ +T ++E
Sbjct: 548 DKDLGTVPMEISILHFLKAHSHPNIVKMITFFEDNE 583
>SPBC3H7.08c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 120
Score = 25.0 bits (52), Expect = 8.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 458 LVSQHRIKVRSPKRCAPTIDDTEQAEGRS 544
L+ QH +VR P + A +DT+ + G+S
Sbjct: 45 LLVQHEDQVRIPSKNAHPWEDTKSSSGKS 73
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,332,675
Number of Sequences: 5004
Number of extensions: 47202
Number of successful extensions: 205
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 250133048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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