Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8f20
         (559 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.1  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.1  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   4.1  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 530 PLISPSRTPPSFLPI 486
           PLIS S +PP   P+
Sbjct: 179 PLISSSSSPPGVFPV 193


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -2

Query: 123 LLHYNYIADCSNTFTPLYNFYLYIFYKTIT 34
           +L+Y Y + C N  T + +F+   F+   T
Sbjct: 163 MLNYVYSSKCENNSTGVEHFFKKQFHYIFT 192


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = -3

Query: 557 FITLHYYYFPLISPSRTPPSFLP--ISPS 477
           F+  +Y   P + P   PP F P  I+PS
Sbjct: 169 FLCNNYLPLPQVPPLPLPPIFAPTMINPS 197


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,193
Number of Sequences: 336
Number of extensions: 2138
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)