Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8f18
         (233 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   4.0  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    19   7.0  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        19   9.3  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    19   9.3  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    19   9.3  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 19.8 bits (39), Expect = 4.0
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -1

Query: 119 FKADIILFKNXXAHVNNIF*NXW 51
           F A  ++ K     +NNI  N W
Sbjct: 190 FVAANVILKTRFKTINNILENLW 212


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 19.0 bits (37), Expect = 7.0
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = -1

Query: 167 CAEATLVLKERTSRFPFKADIILFKNXXAHVNNI 66
           C+    VL       P +   + FKN  +H+N I
Sbjct: 19  CSSDDTVLSVGNENPPPEDTPLSFKNIESHLNAI 52


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 18.6 bits (36), Expect = 9.3
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 178 PPVQVFGLEGR 210
           P +QV G +GR
Sbjct: 103 PSIQVMGYQGR 113


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 18.6 bits (36), Expect = 9.3
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +1

Query: 70  LLTCANXFLNKIMS 111
           LLTC N   N + S
Sbjct: 254 LLTCLNFITNNLKS 267


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 18.6 bits (36), Expect = 9.3
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +1

Query: 70  LLTCANXFLNKIMS 111
           LLTC N   N + S
Sbjct: 254 LLTCLNFITNNLKS 267


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,379
Number of Sequences: 336
Number of extensions: 813
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used:  3320999
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)