Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8f18
(233 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X99666-1|CAA67980.1| 209|Drosophila melanogaster oligomycin sen... 50 6e-07
AY058261-1|AAL13490.1| 209|Drosophila melanogaster GH01760p pro... 50 6e-07
AE014297-1980|AAF55156.1| 209|Drosophila melanogaster CG4307-PA... 50 6e-07
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 30 0.50
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 30 0.50
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 30 0.50
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 30 0.50
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 30 0.50
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 30 0.50
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 30 0.50
>X99666-1|CAA67980.1| 209|Drosophila melanogaster oligomycin
sensitivity conferringprotein precursor protein.
Length = 209
Score = 49.6 bits (113), Expect = 6e-07
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +1
Query: 127 LLVRSLSTSVASAQMVKPPVQVFGLEGRYASALFS 231
LL R+LS++ A A VKPPVQVFGLEGRYA+AL+S
Sbjct: 9 LLSRTLSSAAAQAT-VKPPVQVFGLEGRYATALYS 42
>AY058261-1|AAL13490.1| 209|Drosophila melanogaster GH01760p
protein.
Length = 209
Score = 49.6 bits (113), Expect = 6e-07
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +1
Query: 127 LLVRSLSTSVASAQMVKPPVQVFGLEGRYASALFS 231
LL R+LS++ A A VKPPVQVFGLEGRYA+AL+S
Sbjct: 9 LLSRTLSSAAAQAT-VKPPVQVFGLEGRYATALYS 42
>AE014297-1980|AAF55156.1| 209|Drosophila melanogaster CG4307-PA,
isoform A protein.
Length = 209
Score = 49.6 bits (113), Expect = 6e-07
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +1
Query: 127 LLVRSLSTSVASAQMVKPPVQVFGLEGRYASALFS 231
LL R+LS++ A A VKPPVQVFGLEGRYA+AL+S
Sbjct: 9 LLSRTLSSAAAQAT-VKPPVQVFGLEGRYATALYS 42
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 29.9 bits (64), Expect = 0.50
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -1
Query: 167 CAEATLVLKERTSRFPFKADIILFKNXXAHVNNIF*NXWLLST 39
C ++L+ +RFP K +++LF++ H+ + WLL T
Sbjct: 626 CFRNQIILE--AARFPLKRNLVLFRSKSRHLISFTDKSWLLKT 666
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 29.9 bits (64), Expect = 0.50
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -1
Query: 167 CAEATLVLKERTSRFPFKADIILFKNXXAHVNNIF*NXWLLST 39
C ++L+ +RFP K +++LF++ H+ + WLL T
Sbjct: 621 CFRNQIILE--AARFPLKRNLVLFRSKSRHLISFTDKSWLLKT 661
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 29.9 bits (64), Expect = 0.50
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -1
Query: 167 CAEATLVLKERTSRFPFKADIILFKNXXAHVNNIF*NXWLLST 39
C ++L+ +RFP K +++LF++ H+ + WLL T
Sbjct: 656 CFRNQIILE--AARFPLKRNLVLFRSKSRHLISFTDKSWLLKT 696
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 29.9 bits (64), Expect = 0.50
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -1
Query: 167 CAEATLVLKERTSRFPFKADIILFKNXXAHVNNIF*NXWLLST 39
C ++L+ +RFP K +++LF++ H+ + WLL T
Sbjct: 656 CFRNQIILE--AARFPLKRNLVLFRSKSRHLISFTDKSWLLKT 696
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 29.9 bits (64), Expect = 0.50
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -1
Query: 167 CAEATLVLKERTSRFPFKADIILFKNXXAHVNNIF*NXWLLST 39
C ++L+ +RFP K +++LF++ H+ + WLL T
Sbjct: 621 CFRNQIILE--AARFPLKRNLVLFRSKSRHLISFTDKSWLLKT 661
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 29.9 bits (64), Expect = 0.50
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -1
Query: 167 CAEATLVLKERTSRFPFKADIILFKNXXAHVNNIF*NXWLLST 39
C ++L+ +RFP K +++LF++ H+ + WLL T
Sbjct: 621 CFRNQIILE--AARFPLKRNLVLFRSKSRHLISFTDKSWLLKT 661
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 29.9 bits (64), Expect = 0.50
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -1
Query: 167 CAEATLVLKERTSRFPFKADIILFKNXXAHVNNIF*NXWLLST 39
C ++L+ +RFP K +++LF++ H+ + WLL T
Sbjct: 1074 CFRNQIILE--AARFPLKRNLVLFRSKSRHLISFTDKSWLLKT 1114
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,813,884
Number of Sequences: 53049
Number of extensions: 154594
Number of successful extensions: 421
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 421
length of database: 24,988,368
effective HSP length: 57
effective length of database: 21,964,575
effective search space used: 439291500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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