Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8f18
(233 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF134816-1|AAD40232.1| 50|Apis mellifera unknown protein. 21 2.0
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 20 3.5
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 20 3.5
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 20 3.5
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 20 3.5
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 20 4.6
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 19 6.0
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 19 6.0
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 19 6.0
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 19 6.0
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 19 6.0
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 19 6.0
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 19 8.0
>AF134816-1|AAD40232.1| 50|Apis mellifera unknown protein.
Length = 50
Score = 21.0 bits (42), Expect = 2.0
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -3
Query: 189 LHWRFYHLC 163
++W YHLC
Sbjct: 38 IYWSMYHLC 46
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.2 bits (40), Expect = 3.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 170 ICAEATLVLKERTSR 126
+C E +L+ERTSR
Sbjct: 22 LCNEEEKLLEERTSR 36
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.2 bits (40), Expect = 3.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 170 ICAEATLVLKERTSR 126
+C E +L+ERTSR
Sbjct: 22 LCNEEEKLLEERTSR 36
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.2 bits (40), Expect = 3.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 170 ICAEATLVLKERTSR 126
+C E +L+ERTSR
Sbjct: 22 LCNEEEKLLEERTSR 36
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.2 bits (40), Expect = 3.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 170 ICAEATLVLKERTSR 126
+C E +L+ERTSR
Sbjct: 22 LCNEEEKLLEERTSR 36
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 19.8 bits (39), Expect = 4.6
Identities = 11/49 (22%), Positives = 22/49 (44%)
Frame = +1
Query: 70 LLTCANXFLNKIMSALKGNLLVRSLSTSVASAQMVKPPVQVFGLEGRYA 216
+L C FL + + LLV + + A +V P ++ + G ++
Sbjct: 60 ILVCVAVFLVRKLRRPCNYLLVSLAVSDLCVALLVMPMALLYEISGNWS 108
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 19.4 bits (38), Expect = 6.0
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -2
Query: 64 FKTXGFYRPVIPSPGRVD 11
F+T +Y +I +PG D
Sbjct: 80 FETAKYYVTIIDAPGHRD 97
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 19.4 bits (38), Expect = 6.0
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -2
Query: 64 FKTXGFYRPVIPSPGRVD 11
F+T +Y +I +PG D
Sbjct: 7 FETSKYYVTIIDAPGHRD 24
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 19.4 bits (38), Expect = 6.0
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = +3
Query: 57 VLKNIIDVC 83
+L+NIID+C
Sbjct: 84 LLQNIIDIC 92
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 19.4 bits (38), Expect = 6.0
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -2
Query: 64 FKTXGFYRPVIPSPGRVD 11
F+T +Y +I +PG D
Sbjct: 23 FETSKYYVTIIDAPGHRD 40
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 19.4 bits (38), Expect = 6.0
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +3
Query: 102 NYVGFKGESAG 134
N+VG+KG+ G
Sbjct: 404 NFVGYKGKHIG 414
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 19.4 bits (38), Expect = 6.0
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -2
Query: 64 FKTXGFYRPVIPSPGRVD 11
F+T +Y +I +PG D
Sbjct: 80 FETSKYYVTIIDAPGHRD 97
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 19.0 bits (37), Expect = 8.0
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 91 FLNKIMSALKGN 126
F N I A+KGN
Sbjct: 19 FFNAISGAIKGN 30
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,792
Number of Sequences: 438
Number of extensions: 953
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used: 3772710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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