Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8f11
         (641 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   2.8  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   2.8  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   2.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.7  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   6.5  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   6.5  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   8.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   8.6  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 45  LHFSFKHM*TFYFCVFCIFVLF*YLVLPQLFSIN 146
           + FSFK +       +C+F+LF +       S+N
Sbjct: 276 IRFSFKEIGLLVDSTYCLFLLFVFCDCSHQASLN 309


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 45  LHFSFKHM*TFYFCVFCIFVLF*YLVLPQLFSIN 146
           + FSFK +       +C+F+LF +       S+N
Sbjct: 276 IRFSFKEIGLLVDSTYCLFLLFVFCDCSHQASLN 309


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 45  LHFSFKHM*TFYFCVFCIFVLF*YLVLPQLFSIN 146
           + FSFK +       +C+F+LF +       S+N
Sbjct: 276 IRFSFKEIGLLVDSTYCLFLLFVFCDCSHQASLN 309


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +3

Query: 30  VDYYYLHFSFKHM*TFYFCVFCIFVL 107
           +DY+ LH  F     +++  F IF +
Sbjct: 199 LDYFTLHLLFLPCIYYFYSAFIIFTI 224


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 231 PKLRANLVPTSPDLYVNY 178
           P+LRANL+ +S + +  Y
Sbjct: 119 PELRANLIASSFEYFEKY 136


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -2

Query: 244 QISLPKTSSQSGSHISRPVREL 179
           QIS   T SQS + I +PV  L
Sbjct: 335 QISAQPTPSQSPNQIYQPVTNL 356


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/21 (28%), Positives = 15/21 (71%)
 Frame = +2

Query: 491 KGQIYLKQSSMWSERKRKAAI 553
           KGQ+   ++++W+E+   A++
Sbjct: 511 KGQVLGAEAALWTEQADSASV 531


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/40 (17%), Positives = 23/40 (57%)
 Frame = +3

Query: 72  TFYFCVFCIFVLF*YLVLPQLFSINSLLLIHENERNSSRT 191
           TF+  ++ + ++F + ++P +  +    +I +N  +++ T
Sbjct: 231 TFWSALYFLTIIFLFFIIPLIILLILYCIIAKNLMSNAAT 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,922
Number of Sequences: 336
Number of extensions: 2645
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)