BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8f09
(618 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U62961-1|AAB07366.1| 520|Homo sapiens succinyl CoA:3-oxoacid Co... 162 1e-39
CR457049-1|CAG33330.1| 520|Homo sapiens OXCT protein. 162 1e-39
BC009001-1|AAH09001.1| 520|Homo sapiens 3-oxoacid CoA transfera... 162 1e-39
AB029576-1|BAB13733.1| 520|Homo sapiens succinyl-CoA:3-ketoacid... 162 1e-39
BC072388-1|AAH72388.1| 259|Homo sapiens OXCT2 protein protein. 142 1e-33
AL033527-1|CAI19402.1| 517|Homo sapiens 3-oxoacid CoA transfera... 142 1e-33
AB050193-1|BAB40810.2| 517|Homo sapiens succinyl CoA: 3-oxo aci... 142 1e-33
EF095213-1|ABL01517.1| 150|Homo sapiens succinyl-CoA:3-ketoacid... 104 3e-22
>U62961-1|AAB07366.1| 520|Homo sapiens succinyl CoA:3-oxoacid CoA
transferase precursor protein.
Length = 520
Score = 162 bits (393), Expect = 1e-39
Identities = 78/113 (69%), Positives = 91/113 (80%)
Frame = +2
Query: 278 CATYATIIRKSKIYASAQEVVQDVSDGSKLLVGGFGLCGIPENLIKALNIKKVSALTVVS 457
C+ + R +K Y E V+D+ DG+ +LVGGFGLCGIPENLI AL V LT VS
Sbjct: 30 CSFSTSAHRHTKFYTDPVEAVKDIPDGATVLVGGFGLCGIPENLIDALLKTGVKGLTAVS 89
Query: 458 NNAGVEDFGLGILLKSKQIKRMISSYVGENAEFERQFLSGELEVELTPQGTLA 616
NNAGV++FGLG+LL+SKQIKRM+SSYVGENAEFERQ+LSGELEVELTPQGTLA
Sbjct: 90 NNAGVDNFGLGLLLRSKQIKRMVSSYVGENAEFERQYLSGELEVELTPQGTLA 142
>CR457049-1|CAG33330.1| 520|Homo sapiens OXCT protein.
Length = 520
Score = 162 bits (393), Expect = 1e-39
Identities = 78/113 (69%), Positives = 91/113 (80%)
Frame = +2
Query: 278 CATYATIIRKSKIYASAQEVVQDVSDGSKLLVGGFGLCGIPENLIKALNIKKVSALTVVS 457
C+ + R +K Y E V+D+ DG+ +LVGGFGLCGIPENLI AL V LT VS
Sbjct: 30 CSFSTSAHRHTKFYTDPVEAVKDIPDGATVLVGGFGLCGIPENLIDALLKTGVKGLTAVS 89
Query: 458 NNAGVEDFGLGILLKSKQIKRMISSYVGENAEFERQFLSGELEVELTPQGTLA 616
NNAGV++FGLG+LL+SKQIKRM+SSYVGENAEFERQ+LSGELEVELTPQGTLA
Sbjct: 90 NNAGVDNFGLGLLLRSKQIKRMVSSYVGENAEFERQYLSGELEVELTPQGTLA 142
>BC009001-1|AAH09001.1| 520|Homo sapiens 3-oxoacid CoA transferase
1 protein.
Length = 520
Score = 162 bits (393), Expect = 1e-39
Identities = 78/113 (69%), Positives = 91/113 (80%)
Frame = +2
Query: 278 CATYATIIRKSKIYASAQEVVQDVSDGSKLLVGGFGLCGIPENLIKALNIKKVSALTVVS 457
C+ + R +K Y E V+D+ DG+ +LVGGFGLCGIPENLI AL V LT VS
Sbjct: 30 CSFSTSAHRHTKFYTDPVEAVKDIPDGATVLVGGFGLCGIPENLIDALLKTGVKGLTAVS 89
Query: 458 NNAGVEDFGLGILLKSKQIKRMISSYVGENAEFERQFLSGELEVELTPQGTLA 616
NNAGV++FGLG+LL+SKQIKRM+SSYVGENAEFERQ+LSGELEVELTPQGTLA
Sbjct: 90 NNAGVDNFGLGLLLRSKQIKRMVSSYVGENAEFERQYLSGELEVELTPQGTLA 142
>AB029576-1|BAB13733.1| 520|Homo sapiens succinyl-CoA:3-ketoacid
CoA transferase protein.
Length = 520
Score = 162 bits (393), Expect = 1e-39
Identities = 78/113 (69%), Positives = 91/113 (80%)
Frame = +2
Query: 278 CATYATIIRKSKIYASAQEVVQDVSDGSKLLVGGFGLCGIPENLIKALNIKKVSALTVVS 457
C+ + R +K Y E V+D+ DG+ +LVGGFGLCGIPENLI AL V LT VS
Sbjct: 30 CSFSTSAHRHTKFYTDPVEAVKDIPDGATVLVGGFGLCGIPENLIDALLKTGVKGLTAVS 89
Query: 458 NNAGVEDFGLGILLKSKQIKRMISSYVGENAEFERQFLSGELEVELTPQGTLA 616
NNAGV++FGLG+LL+SKQIKRM+SSYVGENAEFERQ+LSGELEVELTPQGTLA
Sbjct: 90 NNAGVDNFGLGLLLRSKQIKRMVSSYVGENAEFERQYLSGELEVELTPQGTLA 142
>BC072388-1|AAH72388.1| 259|Homo sapiens OXCT2 protein protein.
Length = 259
Score = 142 bits (343), Expect = 1e-33
Identities = 69/117 (58%), Positives = 92/117 (78%), Gaps = 2/117 (1%)
Frame = +2
Query: 272 KSCAT-YATIIR-KSKIYASAQEVVQDVSDGSKLLVGGFGLCGIPENLIKALNIKKVSAL 445
+ CA +AT R ++K YA E+V+D+SDG+ +++GGFGLCGIPENLI AL +V L
Sbjct: 26 QGCARCFATSPRPRAKFYADPVEMVKDISDGATVMIGGFGLCGIPENLIAALLRTRVKDL 85
Query: 446 TVVSNNAGVEDFGLGILLKSKQIKRMISSYVGENAEFERQFLSGELEVELTPQGTLA 616
VVS+N GVEDFGLG+LL ++Q++R++ SYVGEN E Q+L+GELE+ELTPQGTLA
Sbjct: 86 QVVSSNVGVEDFGLGLLLAARQVRRIVCSYVGENTLCESQYLAGELELELTPQGTLA 142
>AL033527-1|CAI19402.1| 517|Homo sapiens 3-oxoacid CoA transferase
2 protein.
Length = 517
Score = 142 bits (343), Expect = 1e-33
Identities = 69/117 (58%), Positives = 92/117 (78%), Gaps = 2/117 (1%)
Frame = +2
Query: 272 KSCAT-YATIIR-KSKIYASAQEVVQDVSDGSKLLVGGFGLCGIPENLIKALNIKKVSAL 445
+ CA +AT R ++K YA E+V+D+SDG+ +++GGFGLCGIPENLI AL +V L
Sbjct: 26 QGCARCFATSPRLRAKFYADPVEMVKDISDGATVMIGGFGLCGIPENLIAALLRTRVKDL 85
Query: 446 TVVSNNAGVEDFGLGILLKSKQIKRMISSYVGENAEFERQFLSGELEVELTPQGTLA 616
VVS+N GVEDFGLG+LL ++Q++R++ SYVGEN E Q+L+GELE+ELTPQGTLA
Sbjct: 86 QVVSSNVGVEDFGLGLLLAARQVRRIVCSYVGENTLCESQYLAGELELELTPQGTLA 142
>AB050193-1|BAB40810.2| 517|Homo sapiens succinyl CoA: 3-oxo acid
CoA transferase protein.
Length = 517
Score = 142 bits (343), Expect = 1e-33
Identities = 69/117 (58%), Positives = 92/117 (78%), Gaps = 2/117 (1%)
Frame = +2
Query: 272 KSCAT-YATIIR-KSKIYASAQEVVQDVSDGSKLLVGGFGLCGIPENLIKALNIKKVSAL 445
+ CA +AT R ++K YA E+V+D+SDG+ +++GGFGLCGIPENLI AL +V L
Sbjct: 26 QGCARCFATSPRLRAKFYADPVEMVKDISDGATVMIGGFGLCGIPENLIAALLRTRVKDL 85
Query: 446 TVVSNNAGVEDFGLGILLKSKQIKRMISSYVGENAEFERQFLSGELEVELTPQGTLA 616
VVS+N GVEDFGLG+LL ++Q++R++ SYVGEN E Q+L+GELE+ELTPQGTLA
Sbjct: 86 QVVSSNVGVEDFGLGLLLAARQVRRIVCSYVGENTLCESQYLAGELELELTPQGTLA 142
>EF095213-1|ABL01517.1| 150|Homo sapiens succinyl-CoA:3-ketoacid
CoA transferase protein.
Length = 150
Score = 104 bits (249), Expect = 3e-22
Identities = 48/54 (88%), Positives = 54/54 (100%)
Frame = +2
Query: 455 SNNAGVEDFGLGILLKSKQIKRMISSYVGENAEFERQFLSGELEVELTPQGTLA 616
SNNAGV++FGLG+LL+SKQIKRM+SSYVGENAEFERQ+LSGELEVELTPQGTLA
Sbjct: 1 SNNAGVDNFGLGLLLRSKQIKRMVSSYVGENAEFERQYLSGELEVELTPQGTLA 54
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,734,248
Number of Sequences: 237096
Number of extensions: 1288737
Number of successful extensions: 6522
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6522
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -