Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8f09
         (618 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058254-1|AAL13483.1|  516|Drosophila melanogaster GH01464p pro...   142   3e-34
AE014296-399|AAF47600.1|  516|Drosophila melanogaster CG1140-PA,...   142   3e-34
AE014296-398|AAN11508.1|  502|Drosophila melanogaster CG1140-PB,...   140   1e-33
BT001845-1|AAN71606.1|  143|Drosophila melanogaster RH54340p pro...    75   8e-14

>AY058254-1|AAL13483.1|  516|Drosophila melanogaster GH01464p
           protein.
          Length = 516

 Score =  142 bits (344), Expect = 3e-34
 Identities = 70/118 (59%), Positives = 86/118 (72%), Gaps = 2/118 (1%)
 Frame = +2

Query: 269 IKSCATYATI--IRKSKIYASAQEVVQDVSDGSKLLVGGFGLCGIPENLIKALNIKKVSA 442
           IK+ A Y+T    R  KIY SA + V DV DG+++L GGFG+CGIPE +I AL  K V  
Sbjct: 19  IKAIACYSTSGKQRNGKIYESAIDAVADVQDGAQILFGGFGICGIPEKMINALKQKGVKN 78

Query: 443 LTVVSNNAGVEDFGLGILLKSKQIKRMISSYVGENAEFERQFLSGELEVELTPQGTLA 616
           +T VSNN GV+D GLG+L+K KQ+ ++I SYVGEN E  RQ+L GEL VELTPQGTLA
Sbjct: 79  ITGVSNNGGVDDTGLGVLIKQKQVSKVIGSYVGENTELVRQYLEGELAVELTPQGTLA 136


>AE014296-399|AAF47600.1|  516|Drosophila melanogaster CG1140-PA,
           isoform A protein.
          Length = 516

 Score =  142 bits (344), Expect = 3e-34
 Identities = 70/118 (59%), Positives = 86/118 (72%), Gaps = 2/118 (1%)
 Frame = +2

Query: 269 IKSCATYATI--IRKSKIYASAQEVVQDVSDGSKLLVGGFGLCGIPENLIKALNIKKVSA 442
           IK+ A Y+T    R  KIY SA + V DV DG+++L GGFG+CGIPE +I AL  K V  
Sbjct: 19  IKAIACYSTSGKQRNGKIYESAIDAVADVQDGAQILFGGFGICGIPEKMINALKQKGVKN 78

Query: 443 LTVVSNNAGVEDFGLGILLKSKQIKRMISSYVGENAEFERQFLSGELEVELTPQGTLA 616
           +T VSNN GV+D GLG+L+K KQ+ ++I SYVGEN E  RQ+L GEL VELTPQGTLA
Sbjct: 79  ITGVSNNGGVDDTGLGVLIKQKQVSKVIGSYVGENTELVRQYLEGELAVELTPQGTLA 136


>AE014296-398|AAN11508.1|  502|Drosophila melanogaster CG1140-PB,
           isoform B protein.
          Length = 502

 Score =  140 bits (339), Expect = 1e-33
 Identities = 69/120 (57%), Positives = 86/120 (71%), Gaps = 2/120 (1%)
 Frame = +2

Query: 263 GKIKSCATYATI--IRKSKIYASAQEVVQDVSDGSKLLVGGFGLCGIPENLIKALNIKKV 436
           G + + A Y+T    R  KIY SA + V DV DG+++L GGFG+CGIPE +I AL  K V
Sbjct: 3   GWLAAIACYSTSGKQRNGKIYESAIDAVADVQDGAQILFGGFGICGIPEKMINALKQKGV 62

Query: 437 SALTVVSNNAGVEDFGLGILLKSKQIKRMISSYVGENAEFERQFLSGELEVELTPQGTLA 616
             +T VSNN GV+D GLG+L+K KQ+ ++I SYVGEN E  RQ+L GEL VELTPQGTLA
Sbjct: 63  KNITGVSNNGGVDDTGLGVLIKQKQVSKVIGSYVGENTELVRQYLEGELAVELTPQGTLA 122


>BT001845-1|AAN71606.1|  143|Drosophila melanogaster RH54340p
           protein.
          Length = 143

 Score = 74.9 bits (176), Expect = 8e-14
 Identities = 39/72 (54%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
 Frame = +2

Query: 269 IKSCATYATI--IRKSKIYASAQEVVQDVSDGSKLLVGGFGLCGIPENLIKALNIKKVSA 442
           IK+ A Y+T    R  KIY SA + V DV DG+++L GGFG+CGIPE +I AL  K V  
Sbjct: 19  IKAIACYSTSGKQRNGKIYESAIDAVADVQDGAQILFGGFGICGIPEKMINALKQKGVKN 78

Query: 443 LTVVSNNAGVED 478
           +T VSNN GV D
Sbjct: 79  ITGVSNNGGVID 90


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,013,756
Number of Sequences: 53049
Number of extensions: 407914
Number of successful extensions: 1249
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)