Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8f08
         (291 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   4.1  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    20   5.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   5.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   5.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   5.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          19   9.4  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     19   9.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    19   9.4  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    19   9.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    19   9.4  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.6 bits (41), Expect = 4.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 158 HHCILRLWQKERTKPEPYA 214
           +  +L  WQKERT    +A
Sbjct: 868 YQLMLDCWQKERTHRPTFA 886


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -2

Query: 149 CLKNMANLGRNWLSIS 102
           CL+ + NLGR  + ++
Sbjct: 403 CLRELRNLGRKTIMVN 418


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 5    TLXVLWMPPQRK 40
            TL V W PP R+
Sbjct: 992  TLKVTWKPPPRE 1003


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +2

Query: 8    LXVLWMPPQRKVSHRNIQ 61
            + + W PP  ++ H +IQ
Sbjct: 1023 ILITWSPPLPELRHGDIQ 1040


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +2

Query: 8    LXVLWMPPQRKVSHRNIQ 61
            + + W PP  ++ H +IQ
Sbjct: 1019 ILITWSPPLPELRHGDIQ 1036


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +1

Query: 88  NKKNELILSQFLPRFAIFLRHTFP 159
           NK N  I    L  +  FLR  FP
Sbjct: 218 NKLNYFIEDIGLNTYYFFLRQAFP 241


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -2

Query: 116 WLSISSFF 93
           WLS SSFF
Sbjct: 416 WLSCSSFF 423


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -2

Query: 167 YNDGNVCLKNMANLGRNWLSISSFFLL 87
           YN+ N  +K+++N  +  +S   FF+L
Sbjct: 531 YNNFNSDIKSISNNEQVKVSALGFFIL 557


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = +3

Query: 171 YDYGKKSERNLNLMPHEYSF 230
           YD+G   +R   +   EY +
Sbjct: 46  YDFGSDEKRQAAIQSGEYDY 65


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -2

Query: 167 YNDGNVCLKNMANLGRNWLSISSFFLL 87
           YN+ N  +K+++N  +  +S   FF+L
Sbjct: 531 YNNFNSDIKSISNNEQVKVSALGFFIL 557


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,458
Number of Sequences: 438
Number of extensions: 1439
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5869407
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)