Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8f05
         (659 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.42 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.7  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   2.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.9  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    22   3.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.0  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   9.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.4 bits (53), Expect = 0.42
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +3

Query: 186  ERITETPTSSWSASTCTITRRPEESTCLGLSLWTWSPGQWTLY 314
            E+ T   TS+ +      T +P +ST    +  +W+PG  T Y
Sbjct: 1324 EKATCDGTSNVNVVDIVTTAKPAQSTTSVSTTTSWNPGSTTNY 1366



 Score = 22.2 bits (45), Expect = 3.9
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +2

Query: 125  NQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEA 247
            N+I  + W V  D  G      YHGD  +  E I    ++A
Sbjct: 911  NRIRNQRWIVNRDTSGATGPFAYHGDQWVGFEDIKSVRDKA 951


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 277 DSPRHVLSSGRLVIVHVDALQLEVG 203
           D+P  +    R++I HVDA  L+ G
Sbjct: 486 DTPDLISDGYRVIISHVDAWYLDCG 510


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 131 FDCRIDRPVCVQFP 90
           FD  I  P+CVQ P
Sbjct: 319 FDKMIGNPICVQIP 332


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 166 LIGYNFPELSSNLIAALTGLYVYNFPHF 83
           L  Y+   ++  ++    GLYV N  HF
Sbjct: 321 LENYSLQLINHRVVFTAMGLYVLNMEHF 348


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 118 LTGLYVYNFPHFKWNKNT 65
           L  LY++ F H+ W+++T
Sbjct: 5   LIPLYLFLFVHYGWSEDT 22


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 484 PVDSLTWRRN 513
           P + LTWRRN
Sbjct: 592 PREQLTWRRN 601


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 484 PVDSLTWRRN 513
           P + LTWRRN
Sbjct: 484 PREQLTWRRN 493


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -3

Query: 219 SSWRSESP*YVPVGSMPCSSDITSQNL 139
           SSW    P   PVG    +S +  Q L
Sbjct: 35  SSWPGRPPKRAPVGLSLAASHLQQQQL 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,678
Number of Sequences: 336
Number of extensions: 3509
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)