Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8f03
(627 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 299 9e-82
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 295 1e-80
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 289 1e-78
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 202 2e-52
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 171 5e-43
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 149 2e-36
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 134 7e-32
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 133 1e-31
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 133 1e-31
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 3e-31
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 131 5e-31
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 1e-30
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 130 1e-30
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 102 2e-22
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 8e-21
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 8e-21
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 71 1e-12
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 69 2e-12
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 66 2e-11
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 65 5e-11
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 2e-07
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 43 2e-04
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 42 5e-04
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 37 0.015
SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_13898| Best HMM Match : DUF987 (HMM E-Value=3.4) 30 1.8
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 28 5.4
SB_2794| Best HMM Match : RNA_pol_Rpb5_C (HMM E-Value=7.2) 28 5.4
SB_32119| Best HMM Match : Glyco_hydro_65m (HMM E-Value=0) 28 5.4
SB_52584| Best HMM Match : FAD_binding_5 (HMM E-Value=2.3e-09) 28 7.1
SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) 28 7.1
SB_1557| Best HMM Match : Keratin_B2 (HMM E-Value=5) 28 7.1
SB_47888| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_41908| Best HMM Match : Pep_M12B_propep (HMM E-Value=1.2e-07) 28 7.1
SB_58557| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 9.4
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 27 9.4
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 299 bits (735), Expect = 9e-82
Identities = 139/159 (87%), Positives = 140/159 (88%)
Frame = +2
Query: 80 FKMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGK 259
FKMREIVH QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGK
Sbjct: 212 FKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGK 271
Query: 260 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 439
YVPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD
Sbjct: 272 YVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 331
Query: 440 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIRE 556
VVRKEAE CDCLQGFQ ISKIRE
Sbjct: 332 VVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 370
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +3
Query: 555 KEYPDRIMNTFSIVPSPKVSDTVV 626
+EYPDRIMNTFS+VPSPKVSDTVV
Sbjct: 370 EEYPDRIMNTFSVVPSPKVSDTVV 393
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 295 bits (725), Expect = 1e-80
Identities = 138/157 (87%), Positives = 138/157 (87%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 265
MREIVH QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 266 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 445
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 446 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIRE 556
RKEAE CDCLQGFQ ISKIRE
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 157
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +3
Query: 555 KEYPDRIMNTFSIVPSPKVSDTVV 626
+EYPDRIMNTFS+VPSPKVSDTVV
Sbjct: 157 EEYPDRIMNTFSVVPSPKVSDTVV 180
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 289 bits (709), Expect = 1e-78
Identities = 132/157 (84%), Positives = 138/157 (87%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 265
MREIV +QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 266 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 445
PR++L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 446 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIRE 556
RKEAE CDC+QGFQ ISKIRE
Sbjct: 121 RKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIRE 157
Score = 52.0 bits (119), Expect = 4e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3
Query: 555 KEYPDRIMNTFSIVPSPKVSDTVV 626
+EYPDRIMNTFSIVPSPKVSDTVV
Sbjct: 157 EEYPDRIMNTFSIVPSPKVSDTVV 180
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 202 bits (492), Expect = 2e-52
Identities = 91/92 (98%), Positives = 91/92 (98%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 265
MREIVH QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 266 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 361
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 171 bits (415), Expect = 5e-43
Identities = 80/101 (79%), Positives = 82/101 (81%)
Frame = +2
Query: 254 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 433
GKYVPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 434 LDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIRE 556
LDVVRKEAE CDC+QGFQ I KIRE
Sbjct: 62 LDVVRKEAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIRE 102
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +3
Query: 555 KEYPDRIMNTFSIVPSPKVSDTVV 626
+EYPDRIMNTFS+VPSPKVSDTVV
Sbjct: 102 EEYPDRIMNTFSVVPSPKVSDTVV 125
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 149 bits (360), Expect = 2e-36
Identities = 66/103 (64%), Positives = 77/103 (74%)
Frame = +2
Query: 248 TGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 427
TGG+YVPR+ILVDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 428 SVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIRE 556
++ DV+RKEAE CDC+QG Q +SKIRE
Sbjct: 71 NIFDVLRKEAENCDCMQGVQLIQALGGGTGSGLGTLILSKIRE 113
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +3
Query: 555 KEYPDRIMNTFSIVPSPKV 611
+EYPDRI++ FS+VPSPKV
Sbjct: 113 EEYPDRILSAFSVVPSPKV 131
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 134 bits (323), Expect = 7e-32
Identities = 64/135 (47%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 259
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 260 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 439
+VPRA+ VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 440 VVRKEAEGCDCLQGF 484
+RK A+ C LQGF
Sbjct: 121 RIRKLADQCTGLQGF 135
Score = 132 bits (319), Expect = 2e-31
Identities = 62/137 (45%), Positives = 85/137 (62%), Gaps = 2/137 (1%)
Frame = +2
Query: 80 FKMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATG 253
++ RE + I GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 432 YEERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 491
Query: 254 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 433
GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD V
Sbjct: 492 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLV 551
Query: 434 LDVVRKEAEGCDCLQGF 484
LD +RK A+ C LQGF
Sbjct: 552 LDRIRKLADQCTGLQGF 568
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 133 bits (322), Expect = 1e-31
Identities = 64/145 (44%), Positives = 90/145 (62%), Gaps = 4/145 (2%)
Frame = +2
Query: 62 KSVFIPFK--MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERIN 229
++VF+ + +RE + I GQ G QIG WE+ EHGI P G D + + N
Sbjct: 576 RAVFVDLEPTVRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFN 635
Query: 230 VYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE 409
+++E GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 636 TFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTV 695
Query: 410 GAELVDSVLDVVRKEAEGCDCLQGF 484
G EL+D VLD +RK A+ C LQGF
Sbjct: 696 GKELIDLVLDRIRKLADQCTGLQGF 720
Score = 132 bits (320), Expect = 2e-31
Identities = 63/140 (45%), Positives = 85/140 (60%), Gaps = 2/140 (1%)
Frame = +2
Query: 71 FIPFKMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNE 244
FI RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 60 FILILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSE 119
Query: 245 ATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELV 424
GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+V
Sbjct: 120 TGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIV 179
Query: 425 DSVLDVVRKEAEGCDCLQGF 484
D VLD +RK A+ C LQGF
Sbjct: 180 DLVLDRIRKLADQCTGLQGF 199
Score = 64.1 bits (149), Expect = 9e-11
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +2
Query: 89 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGKY 262
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 263 VPRAILVDLEPGTMDSV 313
VPRA+ VDLEP + +
Sbjct: 574 VPRAVFVDLEPTVRECI 590
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 133 bits (321), Expect = 1e-31
Identities = 60/135 (44%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 259
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 260 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 439
+VPRA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 440 VVRKEAEGCDCLQGF 484
+RK A+GC LQGF
Sbjct: 121 RLRKLADGCTGLQGF 135
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 132 bits (318), Expect = 3e-31
Identities = 63/137 (45%), Positives = 83/137 (60%), Gaps = 2/137 (1%)
Frame = +2
Query: 80 FKMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATG 253
F RE + I GQ G QIG WE+ EHGI P G D + + N ++ E
Sbjct: 370 FWQRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGA 429
Query: 254 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 433
GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D V
Sbjct: 430 GKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIV 489
Query: 434 LDVVRKEAEGCDCLQGF 484
LD +RK A+GC LQGF
Sbjct: 490 LDRLRKLADGCTGLQGF 506
Score = 128 bits (310), Expect = 3e-30
Identities = 58/137 (42%), Positives = 84/137 (61%), Gaps = 2/137 (1%)
Frame = +2
Query: 80 FKMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATG 253
++ RE + + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 803 YEERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 862
Query: 254 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 433
GK+VPRA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 863 GKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLV 922
Query: 434 LDVVRKEAEGCDCLQGF 484
LD +RK A+ C LQGF
Sbjct: 923 LDRIRKLADQCTGLQGF 939
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 131 bits (316), Expect = 5e-31
Identities = 61/134 (45%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Frame = +2
Query: 89 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGKY 262
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 263 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 442
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 443 VRKEAEGCDCLQGF 484
+RK A+ C LQGF
Sbjct: 121 IRKLADQCTGLQGF 134
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 130 bits (313), Expect = 1e-30
Identities = 59/137 (43%), Positives = 85/137 (62%), Gaps = 2/137 (1%)
Frame = +2
Query: 80 FKMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATG 253
++ RE V I GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 417 YEERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 476
Query: 254 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 433
GK+VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+V
Sbjct: 477 GKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNV 536
Query: 434 LDVVRKEAEGCDCLQGF 484
LD +RK A+ C LQGF
Sbjct: 537 LDRIRKLADQCSGLQGF 553
Score = 111 bits (267), Expect = 4e-25
Identities = 51/120 (42%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Frame = +2
Query: 131 IGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGKYVPRAILVDLEPGTM 304
+G WE+ EHGI P G D + + N +++E GK+VPRA+ DLEP +
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 305 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGF 484
D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK A+ C LQGF
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGF 120
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 130 bits (313), Expect = 1e-30
Identities = 61/135 (45%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 259
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 260 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 439
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 440 VVRKEAEGCDCLQGF 484
RK A+ C LQGF
Sbjct: 121 RCRKLADQCTGLQGF 135
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 102 bits (245), Expect = 2e-22
Identities = 56/135 (41%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 259
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 260 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 439
+VPRA+ VDLEP + P+ + G+ A NN+A+GHYT G + VD VLD
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 440 VVRKEAEGCDCLQGF 484
+RK A+ C LQGF
Sbjct: 111 RLRKLADQCSGLQGF 125
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 97.5 bits (232), Expect = 8e-21
Identities = 41/89 (46%), Positives = 59/89 (66%)
Frame = +2
Query: 218 ERINVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 397
+ N ++ E GK+VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+G
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARG 71
Query: 398 HYTEGAELVDSVLDVVRKEAEGCDCLQGF 484
HYT G E +D LD +RK A+ C LQGF
Sbjct: 72 HYTVGKEHIDLALDRIRKLADQCTGLQGF 100
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 97.5 bits (232), Expect = 8e-21
Identities = 41/82 (50%), Positives = 58/82 (70%)
Frame = +2
Query: 239 NEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 418
+EA GKYVPRA+LVDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 419 LVDSVLDVVRKEAEGCDCLQGF 484
+V+ V+D +RK + C LQGF
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGF 1046
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 72.9 bits (171), Expect = 2e-13
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +2
Query: 305 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGF 484
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 70.5 bits (165), Expect = 1e-12
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = +2
Query: 311 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGF 484
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 60
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 69.3 bits (162), Expect = 2e-12
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQ--LERINVYYNEATGGK 259
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 260 YVPRAILVDLEPGTMDSVR 316
+VPRA+ VDLEP + ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 69.3 bits (162), Expect = 2e-12
Identities = 33/64 (51%), Positives = 39/64 (60%)
Frame = +2
Query: 365 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXIS 544
Q+ A NNWAKG YTEGAEL+DS +D +RK AE CD +QGFQ +S
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLS 61
Query: 545 KIRE 556
KIRE
Sbjct: 62 KIRE 65
Score = 36.3 bits (80), Expect = 0.020
Identities = 13/23 (56%), Positives = 21/23 (91%)
Frame = +3
Query: 555 KEYPDRIMNTFSIVPSPKVSDTV 623
+EYPDR++++F ++PSP VS+TV
Sbjct: 65 EEYPDRLVSSFCVLPSPLVSETV 87
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 66.5 bits (155), Expect = 2e-11
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Frame = +2
Query: 95 IVHIQAGQCGNQIGAKFWEVISDE------HGIDPTGTYHGDSDLQLERINVYYNEATGG 256
IV +Q GQCGNQIG + +++I ++ + T ++ + E + ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVEDATKLNSRFLCKELTTRSCTEYEEESLARFFTRENDD 62
Query: 257 KYVPRAILVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVD 427
RA+ +D+E + S G P F Q G+GNNWA G G + +D
Sbjct: 63 ILNARAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSID 122
Query: 428 SVLDVVRKEAEGCDCLQGF 484
VLD+V++E E CD L GF
Sbjct: 123 KVLDLVQREVEKCDRLDGF 141
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 64.9 bits (151), Expect = 5e-11
Identities = 27/58 (46%), Positives = 39/58 (67%)
Frame = +2
Query: 311 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGF 484
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A+ C LQGF
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGF 60
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +2
Query: 311 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 451
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 311 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 451
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLER----INVYYNEATG 253
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 254 GKY 262
GK+
Sbjct: 254 GKH 256
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 45.2 bits (102), Expect = 4e-05
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 143 FWEVISDEHGIDPTGTYHG-DSDLQLERINVYYNE 244
FWEVI++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 43.2 bits (97), Expect = 2e-04
Identities = 40/133 (30%), Positives = 55/133 (41%), Gaps = 7/133 (5%)
Frame = +2
Query: 104 IQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAILV 283
+ GQCGNQIG + ++ + P H D L R + V
Sbjct: 6 LPVGQCGNQIGHELMTLVEKQCEGKPLS--HRDGKL-------------------RCVCV 44
Query: 284 DLEPGTMDSVR--SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLDV 442
D E + S R G GQ R N + G+ G GNN+A G++ G L+ +D
Sbjct: 45 DSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDA 103
Query: 443 VRKEAEGCDCLQG 481
+RKE E CD G
Sbjct: 104 MRKEVERCDSFAG 116
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 41.5 bits (93), Expect = 5e-04
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 269 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 388
RA+L+D+E G ++++ GP +F + SG GNNW
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 36.7 bits (81), Expect = 0.015
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = +3
Query: 555 KEYPDRIMNTFSIVPSPKVSDTVV 626
+EYPDRI+++ S+ PSP+VS+ VV
Sbjct: 38 EEYPDRILSSVSVFPSPRVSEIVV 61
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 443 VRKEAEGCDCLQGFQ 487
+RKEAE CD +QGFQ
Sbjct: 1 MRKEAEDCDAIQGFQ 15
>SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 395
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +3
Query: 186 ERITETPTSSWSASTCTITRRPEESTC----LGLSLWTWSPGQWTLYARDHS 329
+R+ P SS +TC RR + C G ++ W G WT YAR H+
Sbjct: 127 DRVVVNPNSS--CNTCKACRRGQPHFCEKGGTGSAIGVWKNGGWTQYARVHA 176
>SB_13898| Best HMM Match : DUF987 (HMM E-Value=3.4)
Length = 421
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -3
Query: 415 RAFGVVTLSPVVASTRLP-KDKVVRTEDLTEWSRAYRVHCPGLQVHKDS 272
R +V P +P +D++ T+DLT+W+R Y+ + HK S
Sbjct: 197 RQDSIVNTRPHGLDKSVPARDRLPSTQDLTDWARVYQQETKLYRQHKTS 245
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 415 RAFGVVTLSPVVASTRLP-KDKVVR-TEDLTEWSRAYRVHCPGLQVHKDS 272
R +V P +P +DK + T+DLTEW+R Y+ + HK S
Sbjct: 59 RQDSIVNTRPHGMDKSVPARDKTLSSTQDLTEWTRVYQQETRLYRQHKTS 108
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 28.3 bits (60), Expect = 5.4
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = +2
Query: 62 KSVFIPFKMREIVHIQAGQCGNQIGAKFWEVISDE---HGIDPTGTYHGDSDLQLERINV 232
KS +RE++ +Q G N +G +W + G P + D L E + V
Sbjct: 19 KSKMADATVREVITLQFGHYANFVGTHWWNIQESSFCYDGASPKSEINHDC-LFREGLTV 77
Query: 233 YYNEATGGKYVPRAILVDLE 292
E Y PR +L DL+
Sbjct: 78 TGQET----YTPRLLLYDLK 93
>SB_2794| Best HMM Match : RNA_pol_Rpb5_C (HMM E-Value=7.2)
Length = 371
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 228 TCTITRRPEESTCLGLSLWTWSPGQWTLYARDHSVRSSVRTT 353
TCT + +ST L L TW P +T+ A DH+ S T
Sbjct: 124 TCTCIKDIFKST-LPQELLTWRPDMYTMNAHDHTPSHSPTQT 164
>SB_32119| Best HMM Match : Glyco_hydro_65m (HMM E-Value=0)
Length = 1194
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -3
Query: 343 TEDLTEWSRAYRVHCPGLQVHKDSPRHVLSSGRL 242
+E L++W AYR L+ HK++ + S+GR+
Sbjct: 240 SEALSQWHDAYRSKSSLLETHKEAWSELWSTGRI 273
>SB_52584| Best HMM Match : FAD_binding_5 (HMM E-Value=2.3e-09)
Length = 215
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Frame = -3
Query: 292 LQVHKDSPRHVLSSGRLVIVHVDALQ--LEVGVSVIRSRRIDAML---IGYNFPELSSNL 128
+Q++++SP +L+SGRL + +L+ L++ +RR+ M+ I + P+
Sbjct: 19 VQLNEESPAEILNSGRLTWLRPSSLEQCLKLADEYPNARRVSGMIGAAISSSVPD--DQH 76
Query: 127 IAALTGLYVYNFPHFKWNK 71
+A L+ +V WN+
Sbjct: 77 VAILSLAHVPELNAVDWNE 95
>SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)
Length = 2442
Score = 27.9 bits (59), Expect = 7.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 204 PTSSWSASTCTITRRPEESTC 266
PT SW+ TC I+ + +S C
Sbjct: 1775 PTGSWTCDTCWISNKEADSRC 1795
>SB_1557| Best HMM Match : Keratin_B2 (HMM E-Value=5)
Length = 263
Score = 27.9 bits (59), Expect = 7.1
Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 7/87 (8%)
Frame = -2
Query: 518 LRFLLQVSESTGILADSR---NLQLLF*LHRAQNLPAPRLRCSDP*PSC---CQHPIAQR 357
+RF L + I D R +L + L N P+ RC DP P C C P+
Sbjct: 10 VRFRLVFAIKQAIDVDMRLALSLLVCIALFAFTNASPPKKRCCDPGPGCDNPCGAPMGMM 69
Query: 356 QSCPDGRSDRMVPSVQSPL-SRAPGPQ 279
Q P M+ P+ +AP Q
Sbjct: 70 QPDPFAMQQPMMAPPPYPMYGQAPDMQ 96
>SB_47888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = -3
Query: 364 PKDKVVRTEDLTEWSRAYRVHCPGLQVHKDSPRHVLSSGRLVIVHVD-ALQLEVGVSVIR 188
P++ + D E + + R+ P + D + GRL+++ D + +L VG+++ +
Sbjct: 10 PREDLYNRLDARE-ATSLRISVPAYRKFVDELYSNPNEGRLIVLCKDKSTELLVGIAIFK 68
Query: 187 SRRIDAMLI 161
+ IDA L+
Sbjct: 69 RQNIDADLV 77
>SB_41908| Best HMM Match : Pep_M12B_propep (HMM E-Value=1.2e-07)
Length = 258
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = -3
Query: 355 KVVRTEDL-TEWSRAYRVHCPGLQVHKDSPRHVLSSGRLVIVHVD---ALQLEVGVSVIR 188
KV +++DL +E +R + VH G + + PR V H D AL++ G+S +
Sbjct: 71 KVTKSDDLLSEQARVHTVHKDGSRTSTEVPREAKYYHGHVTSHPDSLVALRIHAGLSGMI 130
Query: 187 SRRIDAMLI 161
D M I
Sbjct: 131 DTSEDTMFI 139
>SB_58557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 537 SFPKSVKEYPDRIMNTFSIVPSPKVSDTVV 626
SFPK R F+++P PK+++TV+
Sbjct: 24 SFPKLANTVISRPKMAFTVLPRPKLANTVI 53
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +2
Query: 155 ISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAILVDLEP 295
+ D G GD L L + +Y E G + V R + LEP
Sbjct: 792 VDDVRGCFQEALKEGDGQLTLNSLIEHYKELEGSEKVARELFAMLEP 838
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 217 GAHQRVL*RGDRRKVRASGYPCGPGARDNGL 309
G H R L G + VRAS P A NGL
Sbjct: 782 GEHDRTLEEGSEQNVRASNLVLHPLANKNGL 812
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,242,814
Number of Sequences: 59808
Number of extensions: 437919
Number of successful extensions: 1272
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1252
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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