Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8f03
(627 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 286 1e-77
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 285 2e-77
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 277 4e-75
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 276 8e-75
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 272 1e-73
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 272 1e-73
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 196 1e-50
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 196 1e-50
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 140 1e-33
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 140 1e-33
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 138 4e-33
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 138 4e-33
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 136 9e-33
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 136 1e-32
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 133 9e-32
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 133 9e-32
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 130 1e-30
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 129 1e-30
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 129 2e-30
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 129 2e-30
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 129 2e-30
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 127 7e-30
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 125 3e-29
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 107 5e-24
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 104 6e-23
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 104 6e-23
AC006608-10|AAF39754.1| 801|Caenorhabditis elegans Hypothetical... 29 2.1
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr... 28 4.8
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z82093-3|CAB05020.1| 222|Caenorhabditis elegans Hypothetical pr... 28 6.3
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 28 6.3
Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical pr... 27 8.3
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 286 bits (701), Expect = 1e-77
Identities = 132/157 (84%), Positives = 137/157 (87%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 265
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTG Y+GDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 266 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 445
PRA LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 446 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIRE 556
RKEAE CDCLQGFQ ISKIRE
Sbjct: 121 RKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIRE 157
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +3
Query: 555 KEYPDRIMNTFSIVPSPKVSDTVV 626
+EYPDRIM TFS+VPSPKVSDTVV
Sbjct: 157 EEYPDRIMMTFSVVPSPKVSDTVV 180
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 285 bits (699), Expect = 2e-77
Identities = 131/157 (83%), Positives = 136/157 (86%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 265
MREIVH+QAGQCGNQIGAKFWEVISDEHGI P GTY G+SDLQLERINVYYNEA GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 266 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 445
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 446 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIRE 556
RKEAEGCDCLQGFQ ISKIRE
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 157
Score = 48.0 bits (109), Expect = 5e-06
Identities = 20/24 (83%), Positives = 24/24 (100%)
Frame = +3
Query: 555 KEYPDRIMNTFSIVPSPKVSDTVV 626
+EYPDRIM++FS+VPSPKVSDTVV
Sbjct: 157 EEYPDRIMSSFSVVPSPKVSDTVV 180
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 277 bits (680), Expect = 4e-75
Identities = 126/157 (80%), Positives = 135/157 (85%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 265
MREIVH+QAGQCGNQIG+KFWEVISDEHGI P GT+ G+SDLQLERI+VYYNEA GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 266 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 445
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 446 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIRE 556
RKEAEGCDCLQGFQ ISKIRE
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 157
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/24 (79%), Positives = 24/24 (100%)
Frame = +3
Query: 555 KEYPDRIMNTFSIVPSPKVSDTVV 626
+E+PDRIM++FS+VPSPKVSDTVV
Sbjct: 157 EEFPDRIMSSFSVVPSPKVSDTVV 180
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 276 bits (677), Expect = 8e-75
Identities = 125/157 (79%), Positives = 135/157 (85%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 265
MREIVH+QAGQCGNQIG+KFWEVISDEHGI P GT+ G++DLQLERI+VYYNEA GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 266 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 445
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 446 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIRE 556
RKEAEGCDCLQGFQ ISKIRE
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 157
Score = 48.0 bits (109), Expect = 5e-06
Identities = 20/24 (83%), Positives = 24/24 (100%)
Frame = +3
Query: 555 KEYPDRIMNTFSIVPSPKVSDTVV 626
+EYPDRIM++FS+VPSPKVSDTVV
Sbjct: 157 EEYPDRIMSSFSVVPSPKVSDTVV 180
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 272 bits (668), Expect = 1e-73
Identities = 127/157 (80%), Positives = 133/157 (84%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 265
MREIVHIQAGQCGNQIG+KFWEVISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 266 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 445
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 446 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIRE 556
RKEAE DCLQGFQ ISKIRE
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 157
Score = 51.6 bits (118), Expect = 4e-07
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +3
Query: 555 KEYPDRIMNTFSIVPSPKVSDTVV 626
+EYPDRIMNTFS+VPSPKVSDTVV
Sbjct: 157 EEYPDRIMNTFSVVPSPKVSDTVV 180
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 272 bits (668), Expect = 1e-73
Identities = 127/157 (80%), Positives = 133/157 (84%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 265
MREIVHIQAGQCGNQIG+KFWEVISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 266 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 445
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 446 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIRE 556
RKEAE DCLQGFQ ISKIRE
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 157
Score = 51.6 bits (118), Expect = 4e-07
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +3
Query: 555 KEYPDRIMNTFSIVPSPKVSDTVV 626
+EYPDRIMNTFS+VPSPKVSDTVV
Sbjct: 157 EEYPDRIMNTFSVVPSPKVSDTVV 180
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 196 bits (478), Expect = 1e-50
Identities = 89/160 (55%), Positives = 114/160 (71%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 265
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ GTY GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 266 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 445
PRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 446 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIRERIS 565
R+EAE D L+GFQ ISK+RE S
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYS 160
Score = 35.5 bits (78), Expect = 0.031
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +3
Query: 555 KEYPDRIMNTFSIVPSPKVSDTVV 626
+EY D+ ++T SI+PS KVSDTVV
Sbjct: 157 EEYSDKTLSTCSIIPSAKVSDTVV 180
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 196 bits (478), Expect = 1e-50
Identities = 89/160 (55%), Positives = 114/160 (71%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 265
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ GTY GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 266 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 445
PRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 446 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIRERIS 565
R+EAE D L+GFQ ISK+RE S
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYS 160
Score = 35.5 bits (78), Expect = 0.031
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +3
Query: 555 KEYPDRIMNTFSIVPSPKVSDTVV 626
+EY D+ ++T SI+PS KVSDTVV
Sbjct: 157 EEYSDKTLSTCSIIPSAKVSDTVV 180
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 140 bits (338), Expect = 1e-33
Identities = 60/133 (45%), Positives = 85/133 (63%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 265
MRE++ I GQ G QIG WE+ EHGI P GT D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 266 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 445
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 446 RKEAEGCDCLQGF 484
R+ A+ C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 140 bits (338), Expect = 1e-33
Identities = 60/133 (45%), Positives = 85/133 (63%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 265
MRE++ I GQ G QIG WE+ EHGI P GT D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 266 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 445
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 446 RKEAEGCDCLQGF 484
R+ A+ C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 138 bits (333), Expect = 4e-33
Identities = 60/133 (45%), Positives = 86/133 (64%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 265
MRE++ I GQ G QIG WE+ EHGI P GT S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 266 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 445
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 446 RKEAEGCDCLQGF 484
R+ A+ C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 138 bits (333), Expect = 4e-33
Identities = 60/133 (45%), Positives = 86/133 (64%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 265
MRE++ I GQ G QIG WE+ EHGI P GT S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 266 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 445
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 446 RKEAEGCDCLQGF 484
R+ A+ C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 136 bits (330), Expect = 9e-33
Identities = 62/138 (44%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
Frame = +2
Query: 74 IPFKMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTY-HGDSDLQLERINVYYNEAT 250
+P RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+
Sbjct: 1 MPSDGRECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESM 60
Query: 251 GGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDS 430
GK+VPRAI VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D
Sbjct: 61 NGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDV 120
Query: 431 VLDVVRKEAEGCDCLQGF 484
VLD +RK+ E C+ LQGF
Sbjct: 121 VLDRIRKQTENCEGLQGF 138
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 136 bits (329), Expect = 1e-32
Identities = 65/135 (48%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLE--RINVYYNEATGGK 259
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 260 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 439
+VPRAI VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 440 VVRKEAEGCDCLQGF 484
VR+ E C LQGF
Sbjct: 121 RVRRLTERCQSLQGF 135
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 133 bits (322), Expect = 9e-32
Identities = 57/133 (42%), Positives = 84/133 (63%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 265
MRE++ I GQ G QIG WE+ EHGI P GT + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 266 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 445
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 446 RKEAEGCDCLQGF 484
R+ A+ C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 133 bits (322), Expect = 9e-32
Identities = 57/133 (42%), Positives = 84/133 (63%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 265
MRE++ I GQ G QIG WE+ EHGI P GT + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 266 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 445
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 446 RKEAEGCDCLQGF 484
R+ A+ C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 130 bits (313), Expect = 1e-30
Identities = 61/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)
Frame = +2
Query: 89 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL---QLERINVYYNEATGGK 259
RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 260 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 439
+VPR + VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D
Sbjct: 67 HVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMD 126
Query: 440 VVRKEAEGCDCLQGF 484
V++ AE C+ LQGF
Sbjct: 127 RVKRLAENCNGLQGF 141
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 129 bits (312), Expect = 1e-30
Identities = 58/136 (42%), Positives = 86/136 (63%), Gaps = 2/136 (1%)
Frame = +2
Query: 83 KMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLE--RINVYYNEATGG 256
+ RE++ I GQ G Q+G WE+ EHGI P G + + L ++ N +++E G
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 257 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 436
K+VPRAI+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 437 DVVRKEAEGCDCLQGF 484
D VR+ E C LQGF
Sbjct: 125 DRVRRLVENCRGLQGF 140
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 129 bits (311), Expect = 2e-30
Identities = 57/135 (42%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 259
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 260 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 439
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 440 VVRKEAEGCDCLQGF 484
+R+ A+ C LQGF
Sbjct: 121 RIRRLADNCTGLQGF 135
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 129 bits (311), Expect = 2e-30
Identities = 57/135 (42%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 259
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 260 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 439
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 440 VVRKEAEGCDCLQGF 484
+R+ A+ C LQGF
Sbjct: 121 RIRRLADNCTGLQGF 135
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 129 bits (311), Expect = 2e-30
Identities = 57/135 (42%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 259
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 260 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 439
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 440 VVRKEAEGCDCLQGF 484
+R+ A+ C LQGF
Sbjct: 121 RIRRLADNCTGLQGF 135
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 127 bits (306), Expect = 7e-30
Identities = 56/134 (41%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Frame = +2
Query: 89 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGKY 262
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 263 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 442
VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 443 VRKEAEGCDCLQGF 484
+R+ A+ C LQGF
Sbjct: 121 IRRLADNCTGLQGF 134
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 125 bits (301), Expect = 3e-29
Identities = 56/133 (42%), Positives = 85/133 (63%)
Frame = +2
Query: 86 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 265
MRE++ I GQ G QIG WE+ EHGI P GT + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHV 59
Query: 266 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 445
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD +
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRI 119
Query: 446 RKEAEGCDCLQGF 484
R+ A C+ LQGF
Sbjct: 120 RRLANNCEGLQGF 132
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 107 bits (258), Expect = 5e-24
Identities = 50/110 (45%), Positives = 71/110 (64%), Gaps = 3/110 (2%)
Frame = +2
Query: 164 EHGIDPTGTYHGDSDL---QLERINVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQ 334
EHGI P G YH + D + E IN ++ E GGK+VPR + VDLEP +D VR+G +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRS 63
Query: 335 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGF 484
+F P+ + G+ A N +A+G YT G E++D V+D V++ AE C+ LQGF
Sbjct: 64 LFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGF 113
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 104 bits (249), Expect = 6e-23
Identities = 50/132 (37%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
Frame = +2
Query: 95 IVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 274
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 275 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 445
+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 446 RKEAEGCDCLQG 481
+EAE + L G
Sbjct: 125 IREAENTNNLDG 136
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 104 bits (249), Expect = 6e-23
Identities = 50/132 (37%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
Frame = +2
Query: 95 IVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 274
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 275 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 445
+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 446 RKEAEGCDCLQG 481
+EAE + L G
Sbjct: 125 IREAENTNNLDG 136
>AC006608-10|AAF39754.1| 801|Caenorhabditis elegans Hypothetical
protein C15F1.2 protein.
Length = 801
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = +3
Query: 204 PTSSWSAS--TCTITRRPEESTCLGLSLWT--WSPGQWTLYARDHSVRSSVRT 350
P+S++ A+ C EE CLG SLW W P + Y H +++ T
Sbjct: 29 PSSNYCAAFVECAAVSLLEERLCLGNSLWRPYWLPERRDTYDCHHKLKNDYNT 81
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 28.3 bits (60), Expect = 4.8
Identities = 25/72 (34%), Positives = 31/72 (43%)
Frame = +3
Query: 195 TETPTSSWSASTCTITRRPEESTCLGLSLWTWSPGQWTLYARDHSVRSSVRTTLSLGNRV 374
TE T + S ST T T P +T + T S A +VR+S TT R
Sbjct: 528 TEASTPTTSTSTSTSTSTPSTTTSTTSTSTTSSTSS---SAPIRAVRTSTPTT----RRT 580
Query: 375 LATTGLRVTTPK 410
TT R TTP+
Sbjct: 581 TTTTPRRTTTPR 592
>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical protein
ZC84.1 protein.
Length = 1556
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 371 PIAQRQSCPDGRSDRMVPSVQSPLSRAPGPQG*PEARTFLRSPRYSTR*CAPA 213
P ++ CP G + + PS SP+ PG +G P ++S + C P+
Sbjct: 1433 PSPDQEKCPRG-NPLIYPSTSSPVLCQPGKRGCPVGFGCVQSSTSNNHICCPS 1484
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 4.8
Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 204 PTSSWSASTCTITRRPEEST-CLGLSLWTWSPGQWTLYARDHSVRSSVRTTLSLG 365
P+S S S TIT P +ST SL + SP T HSV SS TT+S G
Sbjct: 1966 PSSPRSLSQITITPSPSQSTESTQTSLPSSSPSPST-----HSVSSSEGTTMSSG 2015
>Z82093-3|CAB05020.1| 222|Caenorhabditis elegans Hypothetical
protein ZK39.4 protein.
Length = 222
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +1
Query: 244 GDRRKVRASGYPCGPGARDNGLCTLGTIRSDLPSGQLCLWAIG 372
G R G P G GA NG C G R + PSG C+ A G
Sbjct: 30 GGRGGGNGGGRPPGGGA--NGGCGAGWRRLNRPSGGWCVRAFG 70
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = -2
Query: 395 P*PSCCQHPIAQRQSCPDGRSDRMVPSVQSPLSRAPGPQG 276
P PS P + P+G SD + PS P P P G
Sbjct: 977 PGPSGPNGPSDPNKPSPNGPSDPVKPSPSGPSPNGPSPNG 1016
>Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical
protein T21C9.2 protein.
Length = 1058
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 389 AKGHYTEGAELVDSVLDVVRKEAEGCDCLQ 478
++G Y + E +++ LDV+ KE G C +
Sbjct: 407 SQGDYPKAIECIETSLDVLSKELNGVTCFR 436
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,806,258
Number of Sequences: 27780
Number of extensions: 327933
Number of successful extensions: 1080
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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