Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8f01
         (458 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1263 - 32207636-32207938,32208020-32208170,32208263-322085...    28   3.1  
01_07_0299 + 42594363-42594424,42594516-42594798,42595185-425954...    28   3.1  
04_02_0004 - 8430902-8431210,8431295-8431445,8431542-8431830,843...    28   4.2  
08_02_1356 - 26348953-26350062                                         27   5.5  
05_01_0055 - 390371-390457,390637-390715,390804-390856,390951-39...    27   5.5  
09_03_0001 - 11373469-11373862,11374072-11374264,11374414-113744...    27   9.6  

>04_04_1263 - 32207636-32207938,32208020-32208170,32208263-32208500,
            32208604-32208814,32208927-32209108,32209196-32209297,
            32210002-32211187,32212103-32212499,32212551-32212582,
            32212885-32213157,32213307-32213394,32213486-32213723,
            32213824-32214034,32214119-32214300,32214378-32214479,
            32214801-32216224,32216751-32216822,32217688-32217719,
            32218186-32218263,32218425-32218512,32218608-32218845,
            32219060-32219162,32219386-32219558,32219644-32219745,
            32219825-32220606,32220659-32221012,32224055-32224140,
            32224250-32224400,32224534-32224771,32224876-32225119,
            32225190-32225368,32225577-32225675,32225835-32227083
          Length = 3195

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = +3

Query: 252  YYWQ--KDGLMEDVVESFIIEVCEESDIKRRVH 344
            Y W   KDG   D+V+S ++E C   ++ R +H
Sbjct: 3095 YSWSLWKDGNARDLVDSSVVESCPLHEVLRCIH 3127


>01_07_0299 +
           42594363-42594424,42594516-42594798,42595185-42595409,
           42596395-42596592,42596871-42597325,42597824-42597962,
           42598035-42598113,42598686-42598924,42599058-42599362,
           42599449-42599560,42599640-42599804,42599933-42600071,
           42600111-42600219,42600733-42600823,42600940-42601064,
           42601148-42601297,42601383-42601455,42601630-42601810,
           42601888-42602046,42602939-42603085,42603176-42603220,
           42603305-42603382,42603565-42603719,42603875-42603927,
           42604012-42604090,42604271-42604357
          Length = 1310

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = +1

Query: 211 ASTSIINMS*H*RNITGKRMV*WRM-LSNHLLLKYVRR 321
           A+ SI++ S   RN+T K  + WR+ ++NHLL  Y++R
Sbjct: 827 AANSIVSPSL--RNLTSKIALGWRIRMTNHLLQYYLKR 862


>04_02_0004 -
           8430902-8431210,8431295-8431445,8431542-8431830,
           8431873-8432083,8432184-8432380,8432454-8432555,
           8432666-8433998
          Length = 863

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +3

Query: 252 YYWQ--KDGLMEDVVESFIIEVCEESDIKRRVH 344
           Y W   KDG   D V+S I+E C   ++ R +H
Sbjct: 761 YAWSLWKDGNARDFVDSSIVESCPLHEVLRCIH 793


>08_02_1356 - 26348953-26350062
          Length = 369

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = +2

Query: 143 IVVISNRMQRKKRQLFNLMKKEWRALAS*TCLSIRGILLAKGWFNG 280
           +V I +R+  K    F  + + WRAL S   L  R  LLA G F G
Sbjct: 8   LVEILSRLPFKSLARFKCVSRSWRALISGGDLRRRLPLLAAGLFVG 53


>05_01_0055 -
           390371-390457,390637-390715,390804-390856,390951-391105,
           391216-391422,391518-391658,392044-392202,392296-392476,
           393153-393252,393321-393470,393581-393705,394006-394096,
           394364-394472,394558-394657,395143-395307,395401-395506,
           395590-395894,396003-396241,397036-397114,397189-397327,
           398004-398054,398316-398770,398961-399158,399199-399261,
           400212-400436,400706-400988,401109-401170
          Length = 1368

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = +1

Query: 247 RNITGKRMV*WRM-LSNHLLLKYVRR 321
           R +TG+  + WR+ L+NHLL  Y++R
Sbjct: 860 RTLTGRLALGWRIRLTNHLLQYYLKR 885


>09_03_0001 -
           11373469-11373862,11374072-11374264,11374414-11374482,
           11374858-11374984,11375223-11375485,11375697-11375785,
           11375832-11375909,11376070-11376141,11376234-11376372,
           11378857-11379323,11380781-11381345,11382553-11382622
          Length = 841

 Score = 26.6 bits (56), Expect = 9.6
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +3

Query: 222 HHKHVLALEEYYWQKDGL 275
           HHK++++L  Y W+KD L
Sbjct: 589 HHKNLVSLVGYCWEKDHL 606


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,555,742
Number of Sequences: 37544
Number of extensions: 165553
Number of successful extensions: 317
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 317
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 907440304
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)