Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8f01
         (458 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_19753| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.2  
SB_369| Best HMM Match : Pox_A32 (HMM E-Value=0.2)                     28   4.3  
SB_44762| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.3  
SB_21523| Best HMM Match : Pkinase (HMM E-Value=9.5e-14)               27   5.6  
SB_36870| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.5  
SB_42366| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.5  
SB_39695| Best HMM Match : Pecanex_C (HMM E-Value=0)                   27   9.9  
SB_30435| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.9  
SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.9  

>SB_19753| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 375

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = +3

Query: 222 HHKHVLALEEYYWQKDGLMEDVVESFIIEVCEESDIKRRVHQ 347
           H++H++A    +   DG ++DVV+       EE  +K ++ +
Sbjct: 322 HYRHIIAAGGKFVDSDGGLDDVVKDRRFSAAEELHLKAQLEE 363


>SB_369| Best HMM Match : Pox_A32 (HMM E-Value=0.2)
          Length = 856

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -3

Query: 267 PFASNIPLMLRHVYDASARHSFFIKLNSCRFFRCIRF 157
           P ++N+  + R ++    R    ++ N CR  RC RF
Sbjct: 741 PDSANLDCLARRLHQRPLRERHELRKNDCRRCRCCRF 777


>SB_44762| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 892

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -3

Query: 267 PFASNIPLMLRHVYDASARHSFFIKLNSCRFFRCIRF 157
           P ++N+  + R ++    R    ++ N CR  RC RF
Sbjct: 704 PDSANLDCLARRLHQRPLRERHELRKNDCRRCRCCRF 740


>SB_21523| Best HMM Match : Pkinase (HMM E-Value=9.5e-14)
          Length = 322

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 11/58 (18%), Positives = 29/58 (50%)
 Frame = +3

Query: 225 HKHVLALEEYYWQKDGLMEDVVESFIIEVCEESDIKRRVHQILQLLSNLIARVINKIS 398
           H+H++ L+++ W ++ +        I+E C   D+ R +H    L   +  + + +++
Sbjct: 114 HEHIVQLKDFQWDENHIF------LIMEYCGGGDLSRFIHSKRALPERMARKFLRQLA 165


>SB_36870| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 62

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +3

Query: 273 LMEDVVESFIIEVCEESDIKRRVH 344
           L+EDVV++   EV EES I R VH
Sbjct: 38  LVEDVVDAPGFEVVEESKIVRGVH 61


>SB_42366| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 278

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +3

Query: 228 KHVLALEEYYWQKDGLMEDVVESFIIEVCEESDIKRRVHQILQ 356
           + ++ +  Y   K G +ED +ES I     ++ IKR   ++L+
Sbjct: 88  EEMVTIHSYLRSKQGDLEDAIESIIYGPSTQNKIKRWWRELLE 130


>SB_39695| Best HMM Match : Pecanex_C (HMM E-Value=0)
          Length = 1048

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
 Frame = -3

Query: 258 SNIP--LMLRHVYDASARHSFFIKLNSCRF--FRCIRF--EITTILKKFSLQKMIFLK 103
           +NIP  L LRHV+D  A     I LN  R+  FR I+   E    L    LQ++IFL+
Sbjct: 683 ANIPSLLALRHVFDDGADEYKIIMLNK-RYLSFRVIKVNRECVRGLWAGQLQELIFLR 739


>SB_30435| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 457

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
 Frame = -2

Query: 154 NHNDSKE----VFTSKDDIFKMHPLLRTIHPLLRTLLLVSDVVLNYLL 23
           NHN S       FT    +F+    LR I  L +TLL +  V+ N+L+
Sbjct: 19  NHNSSSGSINGTFTGFPTLFQEPYALRIIRLLFQTLLFLGGVIGNFLV 66


>SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1574

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 300 IIEVCEESDIKRRVHQILQLLSNLI-ARVINKISRSF 407
           +I+VC++ DIK R+ +  +   N +  + +N IS  F
Sbjct: 272 VIDVCKQEDIKMRMREWTEYYMNPVRKKTLNVISLEF 308


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,397,725
Number of Sequences: 59808
Number of extensions: 206773
Number of successful extensions: 444
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 439
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 932979724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)