Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8f01
         (458 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ291604-1|CAC20096.1| 1092|Drosophila melanogaster gamma-tubuli...    29   2.3  
AE014298-2157|AAF48460.2| 1092|Drosophila melanogaster CG9201-PB...    29   2.3  
BT021462-1|AAX33610.1|  374|Drosophila melanogaster AT16873p pro...    29   4.0  
AE014298-1038|AAF46259.1|  374|Drosophila melanogaster CG15035-P...    29   4.0  

>AJ291604-1|CAC20096.1| 1092|Drosophila melanogaster gamma-tubulin
           ring protein protein.
          Length = 1092

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 258 WQKDGLMEDVVESFIIEVCEESDIKRRVH 344
           W +   +ED +  FI+E C E D   R H
Sbjct: 558 WWRRAALEDHLREFIVEFCYEEDANTRSH 586


>AE014298-2157|AAF48460.2| 1092|Drosophila melanogaster CG9201-PB,
           isoform B protein.
          Length = 1092

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 258 WQKDGLMEDVVESFIIEVCEESDIKRRVH 344
           W +   +ED +  FI+E C E D   R H
Sbjct: 558 WWRRAALEDHLREFIVEFCYEEDANTRSH 586


>BT021462-1|AAX33610.1|  374|Drosophila melanogaster AT16873p
           protein.
          Length = 374

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +3

Query: 267 DGLMEDVVESFIIEVCEE-SDIKRRVHQILQLLSNLIARVINKISRS 404
           DG+ ++V ESF++EV  E S I   V   LQ+ +N +A +   +S S
Sbjct: 296 DGVYDNVPESFLVEVLTEMSGISNPVR--LQMAANTVALMARTLSFS 340


>AE014298-1038|AAF46259.1|  374|Drosophila melanogaster CG15035-PA
           protein.
          Length = 374

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +3

Query: 267 DGLMEDVVESFIIEVCEE-SDIKRRVHQILQLLSNLIARVINKISRS 404
           DG+ ++V ESF++EV  E S I   V   LQ+ +N +A +   +S S
Sbjct: 296 DGVYDNVPESFLVEVLTEMSGISNPVR--LQMAANTVALMARTLSFS 340


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,643,071
Number of Sequences: 53049
Number of extensions: 304215
Number of successful extensions: 612
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 612
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1518217281
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)