Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8e20
         (659 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam...    29   0.59 
SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|ch...    27   3.2  
SPBC3E7.15c |mug83|SPBC4F6.02c|sphingosine N-acyltransferase Lac...    26   4.2  
SPAC343.19 ||SPAC824.01|phosphatidylinositol 4-kinase Lsb6 |Schi...    26   5.5  
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo...    25   7.3  
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy...    25   7.3  
SPAC458.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1||...    25   9.7  

>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
           Mam3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1082

 Score = 29.1 bits (62), Expect = 0.59
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = -3

Query: 303 SASLENNCSSYVSFIETTPFTFSSSFNCFVIP*KGRAPRITVSSILSYQRLLVTFSMKT 127
           SAS+ +  +S VS++ + P   SSS N  ++     +P ++ S  L+   +  T S  T
Sbjct: 172 SASVSSKVASSVSYVSSEPSDSSSSTNTVILTTSVNSPAVSSSETLTSVSITSTESAYT 230


>SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 701

 Score = 26.6 bits (56), Expect = 3.2
 Identities = 18/100 (18%), Positives = 43/100 (43%)
 Frame = +2

Query: 20  AILKEN*FNPHHENKTFTMSTAMFARVTFYPTLLYNVFMEKVTSRRWYDRIDDTVILGAL 199
           ++LK N  N  +   T     + F +  F  +      +  +  ++  +   D ++L A 
Sbjct: 476 SLLKVNVENSQNAKDTIQKDISAFGKDIFELSAQSERILSNLAEKK--NPNTDQLLLQAN 533

Query: 200 PFQGMTKQLKEEENVKGVVSMNETYELQLFSNDAEVTLLV 319
            +      LK+E N+   +  N+ + + ++SN  ++  L+
Sbjct: 534 SYLAQWDLLKDERNMLKKLGSNDYFNISMYSNHTDIHSLL 573


>SPBC3E7.15c |mug83|SPBC4F6.02c|sphingosine N-acyltransferase
           Lac1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 384

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +2

Query: 305 VTLLVVRYILNPNGYV 352
           +TLLV  Y +NPNGY+
Sbjct: 66  LTLLVGWYFVNPNGYI 81


>SPAC343.19 ||SPAC824.01|phosphatidylinositol 4-kinase Lsb6
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 624

 Score = 25.8 bits (54), Expect = 5.5
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = +2

Query: 128 VFMEKVTSRRWYDRIDD 178
           +F+ K+TSR W++++ D
Sbjct: 450 LFLHKLTSREWWEKLSD 466


>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 572

 Score = 25.4 bits (53), Expect = 7.3
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
 Frame = +2

Query: 5   N*NDSAILKEN*FNPH-HENKTF---TMSTAMFARVTFYPTLLYNVFMEKVTSRRWYDRI 172
           N N S ILK   F+   +E +T     +   + A   + P   +NVF+ ++  R+W  ++
Sbjct: 366 NLNQSVILKNIGFSTGTNEYRTLMKNAIGNLIIAVAGYVPGYWFNVFLVEILGRKWI-QL 424

Query: 173 DDTVILGAL 199
              VI G +
Sbjct: 425 QGFVITGLM 433


>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 573

 Score = 25.4 bits (53), Expect = 7.3
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
 Frame = +2

Query: 5   N*NDSAILKEN*FNPH-HENKTF---TMSTAMFARVTFYPTLLYNVFMEKVTSRRWYDRI 172
           N N S ILK   F+   +E +T     +   + A   + P   +NVF+ ++  R+W  ++
Sbjct: 367 NLNQSVILKNIGFSSGTNEYRTLMKNAIGNLIIAVAGYVPGYWFNVFLVEILGRKWI-QL 425

Query: 173 DDTVILGAL 199
              VI G +
Sbjct: 426 QGFVITGLM 434


>SPAC458.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 340

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 8/24 (33%), Positives = 18/24 (75%)
 Frame = +2

Query: 122 YNVFMEKVTSRRWYDRIDDTVILG 193
           +N+ + K T++ +YD +D +++LG
Sbjct: 254 FNIALFKQTAKNFYDTLDISLLLG 277


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,574,932
Number of Sequences: 5004
Number of extensions: 49540
Number of successful extensions: 109
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 109
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)