Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8e20
         (659 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY333987-1|AAP94732.1|  137|Homo sapiens unknown protein.              89   1e-17
BC020242-1|AAH20242.1|  201|Homo sapiens PTPMT1 protein protein.       88   3e-17
BC014048-1|AAH14048.1|  147|Homo sapiens PTPMT1 protein protein.       36   0.13 

>AY333987-1|AAP94732.1|  137|Homo sapiens unknown protein.
          Length = 137

 Score = 89.4 bits (212), Expect = 1e-17
 Identities = 42/78 (53%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
 Frame = +2

Query: 83  AMFARVTFYPTLLYNVFMEKVTSRR---WYDRIDDTVILGALPFQGMTKQLKEEENVKGV 253
           A  ARV FYPTLLY +F  KV  R    WY RID TV+LGALP + +T+QL ++ENV+GV
Sbjct: 9   AGLARVLFYPTLLYTLFRGKVPGRAHRDWYHRIDPTVLLGALPLRSLTRQLVQDENVRGV 68

Query: 254 VSMNETYELQLFSNDAEV 307
           ++MNE YE +   N ++V
Sbjct: 69  ITMNEEYETRFLCNSSQV 86


>BC020242-1|AAH20242.1|  201|Homo sapiens PTPMT1 protein protein.
          Length = 201

 Score = 87.8 bits (208), Expect = 3e-17
 Identities = 41/77 (53%), Positives = 54/77 (70%), Gaps = 3/77 (3%)
 Frame = +2

Query: 83  AMFARVTFYPTLLYNVFMEKVTSRR---WYDRIDDTVILGALPFQGMTKQLKEEENVKGV 253
           A  ARV FYPTLLY +F  KV  R    WY RID TV+LGALP + +T+QL ++ENV+GV
Sbjct: 9   AGLARVLFYPTLLYTLFRGKVPGRAHRDWYHRIDPTVLLGALPLRSLTRQLVQDENVRGV 68

Query: 254 VSMNETYELQLFSNDAE 304
           ++MNE YE +   N ++
Sbjct: 69  ITMNEEYETRFLCNSSQ 85


>BC014048-1|AAH14048.1|  147|Homo sapiens PTPMT1 protein protein.
          Length = 147

 Score = 35.9 bits (79), Expect = 0.13
 Identities = 13/29 (44%), Positives = 22/29 (75%)
 Frame = +2

Query: 218 KQLKEEENVKGVVSMNETYELQLFSNDAE 304
           +QL ++ENV+GV++MNE YE +   N ++
Sbjct: 3   RQLVQDENVRGVITMNEEYETRFLCNSSQ 31


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,989,425
Number of Sequences: 237096
Number of extensions: 1668368
Number of successful extensions: 2518
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2516
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)