Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8e20
         (659 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071042-1|AAL48664.1|  200|Drosophila melanogaster RE13143p pro...   115   7e-26
AE014297-3379|AAN13956.2|  200|Drosophila melanogaster CG10371-P...   115   7e-26
AE014297-3380|AAF56179.1|  194|Drosophila melanogaster CG10371-P...   109   2e-24

>AY071042-1|AAL48664.1|  200|Drosophila melanogaster RE13143p
           protein.
          Length = 200

 Score =  115 bits (276), Expect = 7e-26
 Identities = 53/77 (68%), Positives = 61/77 (79%)
 Frame = +2

Query: 74  MSTAMFARVTFYPTLLYNVFMEKVTSRRWYDRIDDTVILGALPFQGMTKQLKEEENVKGV 253
           MS AMFARV+FYPTLLYNV MEK ++R WYDRID+ VILGALPF+     L E+EN+K V
Sbjct: 3   MSAAMFARVSFYPTLLYNVLMEKASARNWYDRIDEHVILGALPFRSQANDLIEKENMKAV 62

Query: 254 VSMNETYELQLFSNDAE 304
           VSMNE YEL  FSN+ E
Sbjct: 63  VSMNEDYELTAFSNNTE 79


>AE014297-3379|AAN13956.2|  200|Drosophila melanogaster CG10371-PB,
           isoform B protein.
          Length = 200

 Score =  115 bits (276), Expect = 7e-26
 Identities = 53/77 (68%), Positives = 61/77 (79%)
 Frame = +2

Query: 74  MSTAMFARVTFYPTLLYNVFMEKVTSRRWYDRIDDTVILGALPFQGMTKQLKEEENVKGV 253
           MS AMFARV+FYPTLLYNV MEK ++R WYDRID+ VILGALPF+     L E+EN+K V
Sbjct: 3   MSAAMFARVSFYPTLLYNVLMEKASARNWYDRIDEHVILGALPFRSQANDLIEKENMKAV 62

Query: 254 VSMNETYELQLFSNDAE 304
           VSMNE YEL  FSN+ E
Sbjct: 63  VSMNEDYELTAFSNNTE 79


>AE014297-3380|AAF56179.1|  194|Drosophila melanogaster CG10371-PA,
           isoform A protein.
          Length = 194

 Score =  109 bits (263), Expect = 2e-24
 Identities = 50/73 (68%), Positives = 58/73 (79%)
 Frame = +2

Query: 86  MFARVTFYPTLLYNVFMEKVTSRRWYDRIDDTVILGALPFQGMTKQLKEEENVKGVVSMN 265
           MFARV+FYPTLLYNV MEK ++R WYDRID+ VILGALPF+     L E+EN+K VVSMN
Sbjct: 1   MFARVSFYPTLLYNVLMEKASARNWYDRIDEHVILGALPFRSQANDLIEKENMKAVVSMN 60

Query: 266 ETYELQLFSNDAE 304
           E YEL  FSN+ E
Sbjct: 61  EDYELTAFSNNTE 73


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,963,764
Number of Sequences: 53049
Number of extensions: 517736
Number of successful extensions: 1032
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1032
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)