Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8e18
(640 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54877| Best HMM Match : NAD_binding_4 (HMM E-Value=0) 36 0.021
SB_15004| Best HMM Match : zf-DHHC (HMM E-Value=2.7e-27) 35 0.064
SB_22425| Best HMM Match : PigN (HMM E-Value=0) 31 0.60
SB_42091| Best HMM Match : E-MAP-115 (HMM E-Value=9.5) 31 0.79
SB_32442| Best HMM Match : Sec20 (HMM E-Value=5.3) 31 0.79
SB_5051| Best HMM Match : DUF1193 (HMM E-Value=0.88) 29 2.4
SB_7411| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_1690| Best HMM Match : DUF963 (HMM E-Value=2.1e-07) 29 3.2
SB_43869| Best HMM Match : ig (HMM E-Value=2.7e-06) 28 5.6
SB_242| Best HMM Match : AFP (HMM E-Value=0.45) 28 7.4
SB_32009| Best HMM Match : PKD (HMM E-Value=1.9e-19) 27 9.7
SB_57367| Best HMM Match : DUF1660 (HMM E-Value=1.5) 27 9.7
>SB_54877| Best HMM Match : NAD_binding_4 (HMM E-Value=0)
Length = 373
Score = 36.3 bits (80), Expect = 0.021
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +1
Query: 301 FNFDISKIDWPRYMLIWCIGLRKFIVKDGLKD 396
F FD+ IDW +Y + IG+++F++K+ LK+
Sbjct: 332 FGFDVRVIDWNKYFEDFTIGMKQFLLKEDLKN 363
>SB_15004| Best HMM Match : zf-DHHC (HMM E-Value=2.7e-27)
Length = 559
Score = 34.7 bits (76), Expect = 0.064
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = -2
Query: 330 PIDLRNVKIEQYPVSF*HLVQHGHGVVIDKIPLVPQEIAVQQRHFVYLFIHFNESVITRD 151
PI +R+V +YP++ H+VQ + + I + V I + RH V + +++R
Sbjct: 322 PITIRHVVQVEYPITIRHVVQVEYPITIRHVVQVEYPITI--RHVVQVEYPITSDMLSRH 379
Query: 150 VIQ*KY 133
V+Q +Y
Sbjct: 380 VVQVEY 385
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = -2
Query: 330 PIDLRNVKIEQYPVSF*HLVQHGHGVVIDKIPLVPQEIAVQQRHFVYLFIHFNESVITRD 151
PI +R+V +YP++ H+VQ + + I + V I + RH V + + R
Sbjct: 190 PITIRHVVQVEYPITIRHVVQVEYSITIRHVVQVEYPITI--RHVVQV----EYPITIRH 243
Query: 150 VIQ*KY 133
V+Q +Y
Sbjct: 244 VVQVEY 249
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = -2
Query: 330 PIDLRNVKIEQYPVSF*HLVQHGHGVVIDKIPLVPQEIAVQQRHFVYLFIHFNESVITRD 151
PI +R+V +YP++ H+VQ + + I + V I + RH V + + R
Sbjct: 154 PITIRHVVQVEYPITMRHVVQVEYPITIRHVVQVKYPITI--RHVVQV----EYPITIRH 207
Query: 150 VIQ*KYA 130
V+Q +Y+
Sbjct: 208 VVQVEYS 214
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = -2
Query: 330 PIDLRNVKIEQYPVSF*HLVQHGHGVVIDKIPLVPQEIAVQQRHFVYLFIHFNESVITRD 151
PI +R+V +YP++ H+VQ + + I + V E ++ RH V + + R
Sbjct: 178 PITIRHVVQVKYPITIRHVVQVEYPITIRHV--VQVEYSITIRHVVQV----EYPITIRH 231
Query: 150 VIQ*KY 133
V+Q +Y
Sbjct: 232 VVQVEY 237
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = -2
Query: 330 PIDLRNVKIEQYPVSF*HLVQHGHGVVIDKIPLVPQEIAVQQRHFVYLFIHFNESVITRD 151
PI +R+V +YP++ H+VQ + + I + V I + RH V + + R
Sbjct: 226 PITIRHVVQVEYPITIRHVVQVEYPITIRHVVQVEYPITI--RHVVQV----EYPITIRH 279
Query: 150 VIQ*KY 133
V+Q +Y
Sbjct: 280 VVQVEY 285
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = -2
Query: 330 PIDLRNVKIEQYPVSF*HLVQHGHGVVIDKIPLVPQEIAVQQRHFVYLFIHFNESVITRD 151
PI +R+V +YP++ H+VQ + + I + V I + RH V + + R
Sbjct: 250 PITIRHVVQVEYPITIRHVVQVEYPITIRHVVQVEYPITI--RHVVQV----EYPITIRH 303
Query: 150 VIQ*KY 133
V+Q +Y
Sbjct: 304 VVQVEY 309
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = -2
Query: 330 PIDLRNVKIEQYPVSF*HLVQHGHGVVIDKIPLVPQEIAVQQRHFVYLFIHFNESVITRD 151
PI +R+V +YP++ H+VQ + + I + V I + RH V + + R
Sbjct: 274 PITIRHVVQVEYPITIRHVVQVEYPITIRHVVQVEYPITI--RHVVQV----EYPITIRH 327
Query: 150 VIQ*KY 133
V+Q +Y
Sbjct: 328 VVQVEY 333
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = -2
Query: 330 PIDLRNVKIEQYPVSF*HLVQHGHGVVIDKIPLVPQEIAVQQRHFVYLFIHFNESVITRD 151
PI +R+V +YP++ H+VQ + + I + V I + RH V + + R
Sbjct: 298 PITIRHVVQVEYPITIRHVVQVEYPITIRHVVQVEYPITI--RHVVQV----EYPITIRH 351
Query: 150 VIQ*KY 133
V+Q +Y
Sbjct: 352 VVQVEY 357
>SB_22425| Best HMM Match : PigN (HMM E-Value=0)
Length = 913
Score = 31.5 bits (68), Expect = 0.60
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 552 NITIAFGFVGFICCIKMYLV 611
N T+ GFVG+ICC+ +++V
Sbjct: 407 NTTVTLGFVGWICCVILWIV 426
>SB_42091| Best HMM Match : E-MAP-115 (HMM E-Value=9.5)
Length = 274
Score = 31.1 bits (67), Expect = 0.79
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 375 RERRTQRQRVWNEETEMAEDSSH*FLYAVLWSRI 476
RE+ +R+R E E SH LYA++W R+
Sbjct: 114 REKEREREREREREREKERTLSHVLLYALMWLRV 147
>SB_32442| Best HMM Match : Sec20 (HMM E-Value=5.3)
Length = 126
Score = 31.1 bits (67), Expect = 0.79
Identities = 23/98 (23%), Positives = 47/98 (47%)
Frame = -2
Query: 558 LYFKCLSGDRIQIT*VHKNSTGEI*QRKYDSKEQRIKTNVSYLQPSLFLHSILAVFESVF 379
+Y KC+ + ++ + K S + KY+ KE+++K ++ PS+ L + L + F
Sbjct: 21 IYVKCVEKAKNELLKIRKKSQRKKPTEKYEEKEKQVKA-LNASDPSVHLFACLRLCVWTF 79
Query: 378 HDELSQADAPDQHIARPIDLRNVKIEQYPVSF*HLVQH 265
+ +L + D + +L I++Y F L+ H
Sbjct: 80 NKKLDRKS--DDDGGKQYNLIANSIKKYVKMFFLLLMH 115
>SB_5051| Best HMM Match : DUF1193 (HMM E-Value=0.88)
Length = 634
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Frame = -1
Query: 256 CCHRQDSTGSSGNSRTTKTFCISFHTF*RICNNKRRDTI------KICMFYVKFTRALLI 95
C T SSG SR KTF +S I ++ R +T+ +FY F AL+I
Sbjct: 349 CGRSYPDTNSSGTSRKKKTFHLSPRISQIITDSSRTNTLMRDITKPDWIFYRMFLVALII 408
Query: 94 RLNTSYYT 71
+N ++T
Sbjct: 409 SVNLPHHT 416
>SB_7411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 331 PRYMLIWCIGLRKFIVKDGLKDSEYGMKKQRWLKIAHI 444
P+Y + G+R FI+K GL++ K +WLK+ H+
Sbjct: 132 PKYKEPYGFGVRYFILKQGLQN------KLKWLKLLHV 163
>SB_1690| Best HMM Match : DUF963 (HMM E-Value=2.1e-07)
Length = 222
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = -2
Query: 330 PIDLRNVKIEQYPVSF*HLVQHGHGVVIDKIPLVPQEIAVQQRHFVYLFIHFNESVITRD 151
PI +R+V++E YP++ H+VQ + + I + V I + RH V + + R
Sbjct: 34 PITIRHVQVE-YPITIRHVVQVEYPITIRHVVQVEYPITI--RHVVQV----EYPITIRH 86
Query: 150 VIQ*KY 133
V+Q +Y
Sbjct: 87 VVQVEY 92
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = -2
Query: 330 PIDLRNVKIEQYPVSF*HLVQHGHGVVIDKIPLVPQEIAVQQRHFVYLFIHFNESVITRD 151
PI +R+V +YP++ H+VQ + + I + V E + RH V + + R
Sbjct: 69 PITIRHVVQVEYPITIRHVVQVEYPITIRHV--VQVEYPITNRHVVQV----EYPITIRH 122
Query: 150 VIQ*KY 133
V+Q +Y
Sbjct: 123 VVQVEY 128
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = -2
Query: 330 PIDLRNVKIEQYPVSF*HLVQHGHGVVIDKIPLVPQEIAVQQRHFVYLFIHFNESVITRD 151
PI++R+V +YP++ H+VQ + + I + V I + RH V + + R
Sbjct: 129 PINIRHVVQVEYPITIRHVVQVEYPITIRHVVQVQYPITI--RHVVQV----QYPITIRH 182
Query: 150 VIQ*KY 133
V+Q +Y
Sbjct: 183 VVQVQY 188
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = -2
Query: 330 PIDLRNVKIEQYPVSF*HLVQHGHGVVIDKIPLVPQEIAVQQRHFVYLFIHFNESVITRD 151
PI +R+V QYP++ H+VQ + + I + V I + RH V + + R
Sbjct: 153 PITIRHVVQVQYPITIRHVVQVQYPITIRHVVQVQYPINI--RHVVQV----QYPITIRH 206
Query: 150 VIQ*KY 133
V+Q +Y
Sbjct: 207 VVQVEY 212
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -2
Query: 330 PIDLRNVKIEQYPVSF*HLVQHGHGVVIDKIPLVPQEIAVQQRHFV 193
PI +R+V QYP++ H+VQ + + I + V I + RH +
Sbjct: 177 PITIRHVVQVQYPINIRHVVQVQYPITIRHVVQVEYPITI--RHVI 220
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = -2
Query: 330 PIDLRNVKIEQYPVSF*HLVQHGHGVVIDKIPLVPQEIAVQQRHFVYLFIHFNESVITRD 151
PI +R+V +YP++ H+VQ + + I + V I + RH V + + R
Sbjct: 45 PITIRHVVQVEYPITIRHVVQVEYPITIRHVVQVEYPITI--RHVVQV----EYPITIRH 98
Query: 150 VIQ*KY 133
V+Q +Y
Sbjct: 99 VVQVEY 104
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = -2
Query: 330 PIDLRNVKIEQYPVSF*HLVQHGHGVVIDKIPLVPQEIAVQQRHFVYLFIHFNESVITRD 151
PI +R+V +YP++ H+VQ + + I + V I + RH V + + R
Sbjct: 117 PITIRHVVQVEYPINIRHVVQVEYPITIRHVVQVEYPITI--RHVVQV----QYPITIRH 170
Query: 150 VIQ*KY 133
V+Q +Y
Sbjct: 171 VVQVQY 176
>SB_43869| Best HMM Match : ig (HMM E-Value=2.7e-06)
Length = 399
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 280 SKTDRILFNFDISKIDWPRYMLIWCIGLRKFIVKDGLK 393
+K DR + N D S PR ++W + F +DG++
Sbjct: 128 TKPDRAIINLDCSADGKPRPTVVWLKNGKPFFKRDGVE 165
>SB_242| Best HMM Match : AFP (HMM E-Value=0.45)
Length = 147
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +2
Query: 137 FYCITSLVITDSLKCMKRYTKCLCCTAIS*GTSGI-LSMTTPWPC*TKCQKLTGYCSILT 313
+ C TS T S C YT T+ + TS + TT + C T T Y S +
Sbjct: 8 YTCTTSYTSTTSYTCTTSYTSTTSYTSTTSYTSTTSYTPTTSYTCTTSYTSTTSYTSTTS 67
Query: 314 F 316
+
Sbjct: 68 Y 68
>SB_32009| Best HMM Match : PKD (HMM E-Value=1.9e-19)
Length = 3083
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 232 QWNLVDDNTVAMLNQMSKTDRILF 303
QWN V D +A+ N+ +TD IL+
Sbjct: 2402 QWNFVCDRWIAVENEECRTDVILY 2425
>SB_57367| Best HMM Match : DUF1660 (HMM E-Value=1.5)
Length = 267
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 348 LVHRLEKVHRERRTQRQRVWNEETEMAEDS 437
L R K+H++R+ Q++ N + E ++DS
Sbjct: 101 LSFRTRKIHKQRKIQKENFHNAKEEHSDDS 130
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,647,987
Number of Sequences: 59808
Number of extensions: 415867
Number of successful extensions: 924
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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