Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8e17
         (642 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   1.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.1  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   6.5  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   8.6  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -2

Query: 170 LCNANHEI*PFQNFIFMKCVQTFRIMSFIDFDNLYFDYNHITNNILNLYY 21
           LC   + I  FQNF+F+  + TF I     F   Y D    ++N+ ++Y+
Sbjct: 224 LCQVANSIYGFQNFLFV--LSTFSI-CITQFYYCY-DSGFNSDNLTDVYF 269



 Score = 21.4 bits (43), Expect = 6.5
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -3

Query: 466 NLKRYINSILLFESFLFTILINKVNLT 386
           NL +  NSI  F++FLF +    + +T
Sbjct: 223 NLCQVANSIYGFQNFLFVLSTFSICIT 249


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 481 KIIMKNLKRYINSILLFESFLFTILINKVNLTTT 380
           K ++K  K Y N I+LF   +F IL+   +L  T
Sbjct: 313 KTVLKTNK-YCNFIILFYLSVFVILVYYASLDET 345


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +2

Query: 227 SPMIDVSEYKQI 262
           SPM+ ++EYKQ+
Sbjct: 203 SPMLVIAEYKQL 214


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 377 LGSCQIDFIN*YCK 418
           LG+C I ++  YCK
Sbjct: 55  LGTCWIIYVRIYCK 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,749
Number of Sequences: 336
Number of extensions: 2473
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)