Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8e14
         (451 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.3  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    23   1.8  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   3.1  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   4.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   5.4  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   5.4  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.1  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    20   9.4  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 108 CGSAQVWGNVGKALDLAARALS 173
           CGS Q+W      + LA+RA++
Sbjct: 86  CGSTQLWPQPTGPVTLASRAVT 107


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = +2

Query: 278 INVKLSI*HRKQMFCEIFVQRSIGYF---TSCNATRLVTFGWLLTWL 409
           + + L+  +  ++ CEI   RS+GY+       +  +V   W+  WL
Sbjct: 45  MEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWL 91


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +2

Query: 185 QLVFN*SLFSSSTPFEKYIYTRKSYKPLD*TINVKLSI*HRKQMFCEIFV 334
           QLV + S++SSS  + +Y+  R + K L     +KL   H    FC ++V
Sbjct: 136 QLVLSISVYSSSVGYTQYV--RIAAKGLP---TLKLFALHEFYGFCYLWV 180


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = +3

Query: 111 GSAQVWGNVGKALDLAARALSKKAFNSYSIDPFSVVRLH 227
           G +  WG +G A+D +     K       ++ F+  R+H
Sbjct: 197 GHSGFWGQLGAAVDESRTPRPKHDGRGRIVERFTSDRVH 235


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 121 CALPQLLNFFNLSPLLDTLTCTNSK 47
           C L  L    N +PLLD  T T +K
Sbjct: 8   CVLVTLATARNKAPLLDDGTRTRNK 32


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 451 FPSRVVFLPYQA*NQPS*QPTKSHQSSS 368
           + S  + LP    ++ S  PT SH S S
Sbjct: 184 YQSYQILLPTPTCSEASSSPTPSHSSES 211


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 8/32 (25%), Positives = 14/32 (43%)
 Frame = -2

Query: 417 LKINQVNSQPKVTNRVALQLVKYPMERWTKIS 322
           +K+      PK    V L+ V+    RW  ++
Sbjct: 61  VKVTAAGLDPKAMYTVLLEFVQIDPHRWKYVN 92


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 81  GDKLKKFNNCG 113
           GD L +FN CG
Sbjct: 568 GDALSEFNFCG 578


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,770
Number of Sequences: 336
Number of extensions: 2188
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)