Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8e14
         (451 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88184-3|AAK31519.1|  648|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z95122-1|CAB08354.1|  359|Caenorhabditis elegans Hypothetical pr...    28   2.7  
U53141-1|AAA96103.1|  322|Caenorhabditis elegans Serpentine rece...    28   3.6  
Z81146-6|CAM06584.1|  151|Caenorhabditis elegans Hypothetical pr...    27   6.3  
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl...    27   6.3  
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl...    27   6.3  
AC006674-2|AAF39941.2|  437|Caenorhabditis elegans Hypothetical ...    27   8.3  

>U88184-3|AAK31519.1|  648|Caenorhabditis elegans Hypothetical
           protein F36H5.8 protein.
          Length = 648

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 40  NIIYCLYRLKYPIKVTN*KSLTTVEVHKCG 129
           +I  C Y+ K  + +    SL+++EVHKCG
Sbjct: 269 SISVCAYKRKEKLTLRLRNSLSSLEVHKCG 298


>Z95122-1|CAB08354.1|  359|Caenorhabditis elegans Hypothetical
           protein VZC374L.1 protein.
          Length = 359

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 367 CYSIGDFWLAVNLVDFKLDRARKR 438
           C+S GD W+ + L+D  +D   KR
Sbjct: 129 CFSEGDCWICMELMDISIDFLYKR 152


>U53141-1|AAA96103.1|  322|Caenorhabditis elegans Serpentine
           receptor, class x protein117 protein.
          Length = 322

 Score = 27.9 bits (59), Expect = 3.6
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = -1

Query: 340 TLDENLTKHLLPVLDTQFYVNSLV*WFIRLPCVYIFFKWSRTTEKG 203
           TL+  +T  L PVL  QF   S    F+R    +I FK +   +KG
Sbjct: 243 TLNTTVTYKLFPVLFFQFLTLSFSMVFLRALEGFIMFKMNERIDKG 288


>Z81146-6|CAM06584.1|  151|Caenorhabditis elegans Hypothetical
           protein K10D11.7 protein.
          Length = 151

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 295 TQFYVNSLV*WFIRLPCVY 239
           TQF VNS   W + +PC Y
Sbjct: 51  TQFPVNSACTWLVNIPCNY 69


>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
           methyltransferase-likeprotein 1, isoform b protein.
          Length = 1590

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -1

Query: 445 SRVVFLPYQA*NQPS*QPTKSHQSSSITTSEVSNGT 338
           + +  L   A  QPS  P  S  SSSI+ SEV++ T
Sbjct: 344 ANIPILKTSAFEQPSSPPPSSSVSSSISLSEVNSST 379


>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
           methyltransferase-likeprotein 1, isoform a protein.
          Length = 1604

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -1

Query: 445 SRVVFLPYQA*NQPS*QPTKSHQSSSITTSEVSNGT 338
           + +  L   A  QPS  P  S  SSSI+ SEV++ T
Sbjct: 358 ANIPILKTSAFEQPSSPPPSSSVSSSISLSEVNSST 393


>AC006674-2|AAF39941.2|  437|Caenorhabditis elegans Hypothetical
           protein K12H6.12 protein.
          Length = 437

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
 Frame = -1

Query: 388 KSHQSSSITTSEVSNGTLDENLTKHL--LPVLDTQFYVNSLV 269
           +S+   ++ + E +NG+   NLTKHL  L + D  F+ +SLV
Sbjct: 23  RSNPKFAVISMEENNGSSALNLTKHLFGLGIKDVSFF-DSLV 63


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,116,205
Number of Sequences: 27780
Number of extensions: 202578
Number of successful extensions: 524
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)