Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8e13
         (597 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125952-4|AAD14698.1|  330|Caenorhabditis elegans Hypothetical ...    37   0.009
AC006722-10|ABP57811.1|  330|Caenorhabditis elegans Hypothetical...    37   0.009
Z81077-12|CAH19097.1|  316|Caenorhabditis elegans Hypothetical p...    33   0.20 
AL117193-13|CAB55004.2|  478|Caenorhabditis elegans Hypothetical...    32   0.36 
U28940-6|AAA68352.1|  925|Caenorhabditis elegans Hypothetical pr...    31   0.82 
U40933-4|AAA81674.1|  778|Caenorhabditis elegans Caenorhabditis ...    29   1.9  
AF078790-14|AAC26930.1|  335|Caenorhabditis elegans Hypothetical...    29   2.5  
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e...    29   2.5  
Z81058-7|CAB02920.1| 1011|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z46934-7|CAA87047.1|  472|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z83103-9|CAI79157.1|  376|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z79600-4|CAB01877.1|  213|Caenorhabditis elegans Hypothetical pr...    27   7.7  
AF016670-6|AAB66103.2|  839|Caenorhabditis elegans Hypothetical ...    27   7.7  

>AF125952-4|AAD14698.1|  330|Caenorhabditis elegans Hypothetical
           protein C01B4.6 protein.
          Length = 330

 Score = 37.1 bits (82), Expect = 0.009
 Identities = 18/64 (28%), Positives = 33/64 (51%)
 Frame = +1

Query: 397 KNRMSVQIISYGATITSIQXXXXXXXXXXXXAGFDTLEEYFQPRNPYFGATIGRYANIIR 576
           K  ++  ++ +GAT+  +              GFDT++E F+      G T+GR AN I+
Sbjct: 11  KQGLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDE-FEKDAASIGKTVGRVANRIK 69

Query: 577 DATM 588
           ++T+
Sbjct: 70  NSTL 73


>AC006722-10|ABP57811.1|  330|Caenorhabditis elegans Hypothetical
           protein Y19D10A.16 protein.
          Length = 330

 Score = 37.1 bits (82), Expect = 0.009
 Identities = 18/64 (28%), Positives = 33/64 (51%)
 Frame = +1

Query: 397 KNRMSVQIISYGATITSIQXXXXXXXXXXXXAGFDTLEEYFQPRNPYFGATIGRYANIIR 576
           K  ++  ++ +GAT+  +              GFDT++E F+      G T+GR AN I+
Sbjct: 11  KQGLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDE-FEKDAASIGKTVGRVANRIK 69

Query: 577 DATM 588
           ++T+
Sbjct: 70  NSTL 73


>Z81077-12|CAH19097.1|  316|Caenorhabditis elegans Hypothetical
           protein F36A2.14 protein.
          Length = 316

 Score = 32.7 bits (71), Expect = 0.20
 Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
 Frame = +1

Query: 97  NSKFPVKMAEEGDEKASGDVEEDTKTVTPQPEPKIPDVELIVDGFGLM-PKSM-KVPKNR 270
           NSK   +  ++  +  +   EE  KTV+ + + K+   E    G  L  P ++   P   
Sbjct: 105 NSKKTAEDMDQSSDDTTKPAEETKKTVSSKKQKKVKSEECDHLGVPLSNPMAITPFPGKT 164

Query: 271 TSNAFEESKQMLKEI--KVTNEEAKSPCSSSTN 363
           T+   E+++QMLKE+  K+  ++ K    SST+
Sbjct: 165 TAAKREKARQMLKELATKMYEDDLKKQGKSSTS 197


>AL117193-13|CAB55004.2|  478|Caenorhabditis elegans Hypothetical
           protein Y105C5A.24 protein.
          Length = 478

 Score = 31.9 bits (69), Expect = 0.36
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = +1

Query: 175 VTPQPEPKIPDVELIVDGFGLMPKSMKVPKNRTSNAFEESKQMLKEIKVTNEEAK 339
           +TP  +PK      + +   L+P ++KVPK     + EE KQ +    ++NE+ +
Sbjct: 340 ITPDVKPKEVAPAKVQETPALLPDTLKVPKVERQISNEEEKQKIFMTALSNEDTR 394


>U28940-6|AAA68352.1|  925|Caenorhabditis elegans Hypothetical
           protein T24H7.2 protein.
          Length = 925

 Score = 30.7 bits (66), Expect = 0.82
 Identities = 22/69 (31%), Positives = 33/69 (47%)
 Frame = +1

Query: 109 PVKMAEEGDEKASGDVEEDTKTVTPQPEPKIPDVELIVDGFGLMPKSMKVPKNRTSNAFE 288
           P    E+ +EK S  VE+ T    P+PEP+ P      +     PK+ +  KN +S    
Sbjct: 590 PQSTEEKTEEKESVKVEDST----PEPEPETPVNSTSEES----PKTNETEKNASSGNAT 641

Query: 289 ESKQMLKEI 315
           E K+  KE+
Sbjct: 642 EVKEKKKEL 650


>U40933-4|AAA81674.1|  778|Caenorhabditis elegans Caenorhabditis
           zeste white 10 (drosophila) homolog protein 1 protein.
          Length = 778

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -3

Query: 496 ILRPHHQERLFCQEPG--LR*SWLHTKLSEHSSYFSFSKCTV 377
           + + H     F +E G  L   W H + S+  S+F+F KCTV
Sbjct: 423 LAKAHTHAEHFAKEYGKDLGRLWSHNEDSQFPSFFAFQKCTV 464


>AF078790-14|AAC26930.1|  335|Caenorhabditis elegans Hypothetical
           protein F36H12.3 protein.
          Length = 335

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
 Frame = +1

Query: 115 KMAEEGDEKASGDVEEDTKTVTPQP-EPKIPDVELIVDGFGLMPKSMKVPKNRTSNAFEE 291
           K  EE  E+   + +ED K V P+P EPK P + +   G  LM K+ +  + + +     
Sbjct: 196 KKEEEKKEEKKEEKKEDEKKVEPKPGEPK-PHISIEPPG-DLMFKADQQEQKKLTLTNTH 253

Query: 292 SKQMLKEIKVTNEE 333
            K+++ +IK ++ +
Sbjct: 254 DKKIMFKIKTSDNQ 267


>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
            mutant phenotypeprotein 1 protein.
          Length = 4177

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
 Frame = +1

Query: 115  KMAEEGDEKASGDVEEDTKTVTPQPEPKI--PDVELIVDGF-GLMPKSMKVPKNRTSNAF 285
            ++ E+ DE+  GDVEE+   V    +  +   D E+ +D   G  P     P  + +  F
Sbjct: 811  EIPEQADERVGGDVEEEPMEVEDAEDSDVDEEDNEMSMDEMSGEAPAPPAAPSPKPTKPF 870

Query: 286  EESKQMLKE 312
            E    M+ E
Sbjct: 871  EYGAGMMCE 879


>Z81058-7|CAB02920.1| 1011|Caenorhabditis elegans Hypothetical
           protein F11E6.7 protein.
          Length = 1011

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 18/38 (47%), Positives = 25/38 (65%)
 Frame = +1

Query: 280 AFEESKQMLKEIKVTNEEAKSPCSSSTNIEVVRRYTWR 393
           A E ++++LKE K+  EE +SP +SST  E  RR T R
Sbjct: 234 ADEVAEKLLKEQKLKAEETQSPKTSST--ETSRRRTSR 269


>Z46934-7|CAA87047.1|  472|Caenorhabditis elegans Hypothetical
           protein ZK1320.9 protein.
          Length = 472

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 19/79 (24%), Positives = 37/79 (46%)
 Frame = +1

Query: 208 VELIVDGFGLMPKSMKVPKNRTSNAFEESKQMLKEIKVTNEEAKSPCSSSTNIEVVRRYT 387
           ++LI  G     K   +P    S+    +K+  K+I    E   +PC  + +I++VRR +
Sbjct: 281 IDLIDRGIINNQKKAFMPGKTVSSFAFGTKEFYKKIDNNPEFYFAPCDFTNHIDIVRRNS 340

Query: 388 WRTKNRMSVQIISYGATIT 444
             T    +++I   G  ++
Sbjct: 341 KMTSINSAIEIDLTGQIVS 359


>Z83103-9|CAI79157.1|  376|Caenorhabditis elegans Hypothetical
           protein D1025.10 protein.
          Length = 376

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = +1

Query: 121 AEEGDEKASGDVEEDTKTVTPQPEPKIPDVELIV---DGFGLMPKSMKV 258
           AEEG E+   +VEED + V    E K+ +V  +    D    MPK MK+
Sbjct: 143 AEEGQEEVVEEVEEDEEEVEEIKE-KVEEVREVTPPKDLINGMPKYMKI 190


>Z79600-4|CAB01877.1|  213|Caenorhabditis elegans Hypothetical
           protein F59C6.6 protein.
          Length = 213

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +1

Query: 103 KFPVKMAEEGDEKASGDVEEDTKTVTPQPEPK 198
           + PV    EG+++   D+     T  PQP PK
Sbjct: 172 RVPVDPEAEGEDRVKRDLSFSPNTEAPQPPPK 203


>AF016670-6|AAB66103.2|  839|Caenorhabditis elegans Hypothetical
           protein K02F6.3 protein.
          Length = 839

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +1

Query: 337 KSPCSSSTNIEVVRRYTWRTKNRMSVQIISYGATITSIQ 453
           K   +   ++++++ Y     +RMS QI+  GAT TS+Q
Sbjct: 325 KIAVNDQKSLDILKEYL-SAFDRMSSQIVEIGATFTSLQ 362


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,189,520
Number of Sequences: 27780
Number of extensions: 249904
Number of successful extensions: 981
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)