Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8e12
         (324 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0IFW8 Cluster: Putative uncharacterized protein; n=1; ...    34   0.53 
UniRef50_UPI0000DB7034 Cluster: PREDICTED: similar to CG14881-PA...    33   1.6  
UniRef50_Q5CTB5 Cluster: WD repeat protein; n=3; Eukaryota|Rep: ...    33   1.6  
UniRef50_A4HIG6 Cluster: Zinc-finger protein, conserved; n=1; Le...    33   1.6  
UniRef50_UPI00015B513B Cluster: PREDICTED: similar to GA17864-PA...    32   2.1  
UniRef50_UPI0000E4921B Cluster: PREDICTED: hypothetical protein;...    32   2.8  
UniRef50_Q4N8X2 Cluster: Putative uncharacterized protein; n=2; ...    31   4.9  
UniRef50_A3UGC3 Cluster: Putative methyl-accepting chemotaxis pr...    31   6.5  
UniRef50_Q4N027 Cluster: Putative uncharacterized protein; n=1; ...    31   6.5  
UniRef50_Q555J5 Cluster: Putative uncharacterized protein; n=1; ...    30   8.6  

>UniRef50_Q0IFW8 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 201

 Score = 34.3 bits (75), Expect = 0.53
 Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +1

Query: 13  PEILCSRL-KDVNELKLSAFYKTCDKPWSYANMTAEAPLCCENSQVKVCSSVVTL 174
           P ++C  + +D    +   FY+ C   W  +N++A    CC+N +   C+ +  +
Sbjct: 114 PALICGTIDRDCFRERAYLFYQNCAPRWVNSNLSAGREFCCQNDRPVRCAKMAAV 168


>UniRef50_UPI0000DB7034 Cluster: PREDICTED: similar to CG14881-PA,
           isoform A; n=3; Coelomata|Rep: PREDICTED: similar to
           CG14881-PA, isoform A - Apis mellifera
          Length = 341

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 16  EILCSRL-KDVNELKLSAFYKTCDKPWSYANMTAEAPLCCENSQVKVC 156
           +ILCS + +D  + K   F K C   W   N++A    CC++ +   C
Sbjct: 291 KILCSSIERDCYKEKAYLFIKNCKSGWINTNLSAGREYCCKDGRPYKC 338


>UniRef50_Q5CTB5 Cluster: WD repeat protein; n=3; Eukaryota|Rep: WD
            repeat protein - Cryptosporidium parvum Iowa II
          Length = 3948

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -1

Query: 303  SNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLC 196
            +N +IN  T + +Y+  RLS I K   +N+L+G LC
Sbjct: 3638 NNGIINQETKKSVYD--RLSCIVKKEELNQLFGDLC 3671


>UniRef50_A4HIG6 Cluster: Zinc-finger protein, conserved; n=1;
           Leishmania braziliensis|Rep: Zinc-finger protein,
           conserved - Leishmania braziliensis
          Length = 1177

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +3

Query: 78  VRQTMELRKHDCRSPTLLRKFPSESLFVGGNTKINSATGSK 200
           V++  E  K   R+PTL  + PS+SLFVG    +    G K
Sbjct: 206 VQKQQEHHKATTRAPTLAHQTPSDSLFVGNTPPVLHEAGRK 246


>UniRef50_UPI00015B513B Cluster: PREDICTED: similar to GA17864-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           GA17864-PA - Nasonia vitripennis
          Length = 160

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +1

Query: 13  PEILCSRL-KDVNELKLSAFYKTCDKPWSYANMTAEAPLCCENSQVKVC 156
           P ILC  + +D ++ +   F K C   W   N++A    CC++     C
Sbjct: 108 PSILCGSIDRDCHKERAYLFIKNCKDEWINTNLSAGREYCCKDGLPYKC 156


>UniRef50_UPI0000E4921B Cluster: PREDICTED: hypothetical protein;
           n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 1782

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +1

Query: 73  KTCDKPWSYANMTAEAPLCCENSQVKVCSSVVTLKST 183
           K  D P    ++TAEA L   +S++ VCSS  TL S+
Sbjct: 547 KASDSPLKMQSVTAEALLTSSSSELDVCSSEETLTSS 583


>UniRef50_Q4N8X2 Cluster: Putative uncharacterized protein; n=2;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 1746

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +3

Query: 162 GGNTKINSATGSKDYHIIY*QSYFYE*MKVYKNYK*NELYLHLLH 296
           GGNTK N  TGS+D  +   QS   E + +  N   N++ +++LH
Sbjct: 784 GGNTKNNKITGSEDNEVSE-QSLIREILVLLYNKANNDIVVNILH 827


>UniRef50_A3UGC3 Cluster: Putative methyl-accepting chemotaxis
           protein; n=1; Oceanicaulis alexandrii HTCC2633|Rep:
           Putative methyl-accepting chemotaxis protein -
           Oceanicaulis alexandrii HTCC2633
          Length = 566

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 22/68 (32%), Positives = 31/68 (45%)
 Frame = +1

Query: 4   AKGPEILCSRLKDVNELKLSAFYKTCDKPWSYANMTAEAPLCCENSQVKVCSSVVTLKST 183
           AK  + LC++LKD   L+ S   K   +    A   AE     EN+  KV S+V+     
Sbjct: 255 AKAVQDLCAKLKDAEALRQSELDKQTGEA-ERAERLAEEISKFENAAQKVLSAVIEAARE 313

Query: 184 VQPEAKTT 207
           V   A+ T
Sbjct: 314 VHASAEAT 321


>UniRef50_Q4N027 Cluster: Putative uncharacterized protein; n=1;
            Theileria parva|Rep: Putative uncharacterized protein -
            Theileria parva
          Length = 1125

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -1

Query: 291  INANTVRFIYNFYRLSFIRKNNSVNKLYGSLCFRLH 184
            IN+ T+R IYN+    FI +NN   +L  +L  + H
Sbjct: 1019 INSQTLRVIYNYRTWKFIIQNNLKTELLSNLSSQTH 1054


>UniRef50_Q555J5 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 90

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 281 IQFVLFIIFIDFHLFVKITLLINYMVVFASGC 186
           I ++LFIIFI   +F+ I  LI+++  F   C
Sbjct: 49  INYLLFIIFIFIFIFIFIFFLISFLFFFCCCC 80


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 270,662,164
Number of Sequences: 1657284
Number of extensions: 4523374
Number of successful extensions: 12363
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12359
length of database: 575,637,011
effective HSP length: 84
effective length of database: 436,425,155
effective search space used: 10037778565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)