BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8e12
(324 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2 pr... 22 1.4
EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1 pr... 22 1.4
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 21 3.2
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 21 3.2
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 21 3.2
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 21 3.2
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 21 3.2
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 21 4.3
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 21 4.3
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 4.3
AM712903-1|CAN84642.1| 148|Tribolium castaneum hypothetical pro... 20 7.5
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 20 7.5
AJ969955-1|CAI94742.1| 160|Tribolium castaneum torso-like prote... 20 7.5
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 20 7.5
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 19 9.9
EF222288-1|ABN79648.1| 73|Tribolium castaneum adipokinetic hor... 19 9.9
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 19 9.9
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 19 9.9
>EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2
protein.
Length = 237
Score = 22.2 bits (45), Expect = 1.4
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +1
Query: 70 YKTCDKPWSYANMTAEAPLC 129
+ +CDK W N AE C
Sbjct: 35 HTSCDKYWKCDNNVAELKTC 54
>EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1
protein.
Length = 274
Score = 22.2 bits (45), Expect = 1.4
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +1
Query: 70 YKTCDKPWSYANMTAEAPLC 129
+ +CDK W N AE C
Sbjct: 35 HTSCDKYWKCDNNVAELKTC 54
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 21.0 bits (42), Expect = 3.2
Identities = 5/21 (23%), Positives = 13/21 (61%)
Frame = -1
Query: 168 YHRRTNFHLGIFAAKWGFGSH 106
YH N++ + + +G+G++
Sbjct: 64 YHNHQNYNSNVLSNGYGYGNY 84
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.0 bits (42), Expect = 3.2
Identities = 5/21 (23%), Positives = 13/21 (61%)
Frame = -1
Query: 168 YHRRTNFHLGIFAAKWGFGSH 106
YH N++ + + +G+G++
Sbjct: 64 YHNHQNYNSNVLSNGYGYGNY 84
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 21.0 bits (42), Expect = 3.2
Identities = 6/19 (31%), Positives = 14/19 (73%)
Frame = -2
Query: 269 LFIIFIDFHLFVKITLLIN 213
L + F+D+ +F+ ++L+N
Sbjct: 390 LILSFVDYFVFLLCSILVN 408
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.0 bits (42), Expect = 3.2
Identities = 5/21 (23%), Positives = 13/21 (61%)
Frame = -1
Query: 168 YHRRTNFHLGIFAAKWGFGSH 106
YH N++ + + +G+G++
Sbjct: 64 YHNHQNYNSNVLSNGYGYGNY 84
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 21.0 bits (42), Expect = 3.2
Identities = 5/21 (23%), Positives = 13/21 (61%)
Frame = -1
Query: 168 YHRRTNFHLGIFAAKWGFGSH 106
YH N++ + + +G+G++
Sbjct: 64 YHNHQNYNSNVLSNGYGYGNY 84
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 20.6 bits (41), Expect = 4.3
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -3
Query: 298 QCNKCKYS 275
QCNKC Y+
Sbjct: 260 QCNKCDYT 267
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 20.6 bits (41), Expect = 4.3
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -3
Query: 298 QCNKCKYS 275
QCNKC Y+
Sbjct: 18 QCNKCDYT 25
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 20.6 bits (41), Expect = 4.3
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -2
Query: 245 HLFVKITLLINYMV 204
HLFVK L+ Y +
Sbjct: 779 HLFVKCVFLMGYQI 792
>AM712903-1|CAN84642.1| 148|Tribolium castaneum hypothetical
protein protein.
Length = 148
Score = 19.8 bits (39), Expect = 7.5
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -1
Query: 312 FEISNSVINANTVRFIYNFYRLSFIRKNNSVNK 214
+EI+ + + T + +NF + F N SV K
Sbjct: 116 YEITRFIRSRETDVYTHNFVKDIFYPANISVEK 148
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 19.8 bits (39), Expect = 7.5
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = +1
Query: 130 CENSQVKVCSSVVTLKSTVQPEAKTTI 210
C+ ++K C SV V PE + +
Sbjct: 240 CQECRLKKCLSVGMRPECVVPEVQCAV 266
>AJ969955-1|CAI94742.1| 160|Tribolium castaneum torso-like protein
protein.
Length = 160
Score = 19.8 bits (39), Expect = 7.5
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 255 KNYK*NELYLHLLHCY 302
KN N ++H HCY
Sbjct: 26 KNLGINSSFVHKEHCY 41
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 19.8 bits (39), Expect = 7.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 112 AEAPLCCENSQVKVCSSVVTLKSTVQP 192
+E PL C + C+S + S VQP
Sbjct: 70 SEDPLNCRDLPNSRCNSRESSDSLVQP 96
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 19.4 bits (38), Expect = 9.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 63 SFLQNVRQTMELRKHD 110
S L+N+RQ E K+D
Sbjct: 630 SILKNLRQKAEADKND 645
>EF222288-1|ABN79648.1| 73|Tribolium castaneum adipokinetic
hormone 1 protein.
Length = 73
Score = 19.4 bits (38), Expect = 9.9
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = -2
Query: 221 LINYMVVFASGCTVDFSVTTD 159
LI ++ F CT + +TD
Sbjct: 6 LIVVLIAFVGVCTAQLNFSTD 26
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 19.4 bits (38), Expect = 9.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 97 YANMTAEAPLCCENSQVKV 153
+ ++ A L CEN VKV
Sbjct: 615 HRDLAARNVLVCENHTVKV 633
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 19.4 bits (38), Expect = 9.9
Identities = 9/24 (37%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +1
Query: 25 CS-RLKDVNELKLSAFYKTCDKPW 93
CS + D N+LK T +KP+
Sbjct: 224 CSMKFSDSNQLKAHVLIHTNEKPF 247
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,088
Number of Sequences: 336
Number of extensions: 1224
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used: 6155018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
- SilkBase 1999-2023 -