Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8e08
         (180 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   2.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   2.7  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    19   3.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    19   6.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    19   6.1  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    18   8.1  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 42   SLFMFCHLRDFVV 4
            SLF FC   +F++
Sbjct: 978  SLFFFCMAAEFII 990


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 42   SLFMFCHLRDFVV 4
            SLF FC   +F++
Sbjct: 978  SLFFFCMAAEFII 990


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 60  QFYRNAEVKTLILLNISLC 116
           QFY+ A      +++ SLC
Sbjct: 68  QFYKTAYSAIFTVIDFSLC 86


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B
          protein.
          Length = 712

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 7/19 (36%), Positives = 8/19 (42%)
 Frame = -1

Query: 78 QRFCKIGXXGFFSLFMFCH 22
          QR+  I     F  F  CH
Sbjct: 5  QRYLLIATAALFLFFDLCH 23


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A
          protein.
          Length = 717

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 7/19 (36%), Positives = 8/19 (42%)
 Frame = -1

Query: 78 QRFCKIGXXGFFSLFMFCH 22
          QR+  I     F  F  CH
Sbjct: 5  QRYLLIATAALFLFFDLCH 23


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 26  QNIKRLKKPFXPILQK 73
           ++IKRLKK +  I ++
Sbjct: 85  RSIKRLKKEYPKIWEQ 100


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,177
Number of Sequences: 336
Number of extensions: 316
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 39
effective length of database: 109,481
effective search space used:  2189620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)