Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8e07
(634 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY600516-1|AAT11864.1| 143|Tribolium castaneum optomotor-blind-... 23 2.8
AY600515-1|AAT11863.1| 134|Tribolium castaneum optomotor-blind-... 23 2.8
AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 22 4.9
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.5
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.5
AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan oxyge... 21 6.5
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 21 6.5
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 21 6.5
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 21 8.6
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 21 8.6
AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein. 21 8.6
>AY600516-1|AAT11864.1| 143|Tribolium castaneum
optomotor-blind-like protein protein.
Length = 143
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +2
Query: 407 NRYNIISDSQPVQPFDLKFHNDRW 478
++Y ++ D KFHN RW
Sbjct: 17 SKYILLMDIVAADDCRYKFHNSRW 40
>AY600515-1|AAT11863.1| 134|Tribolium castaneum
optomotor-blind-like protein protein.
Length = 134
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +2
Query: 407 NRYNIISDSQPVQPFDLKFHNDRW 478
++Y ++ D KFHN RW
Sbjct: 17 SKYILLMDIVAADDCRYKFHNSRW 40
>AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein.
Length = 301
Score = 21.8 bits (44), Expect = 4.9
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +2
Query: 122 MQFQPLMPCNAPHFAPPSSNLPHNII-GEGDVV 217
MQF L A H A S +PHN+ +G V+
Sbjct: 114 MQFMQLPHPAAAHSALLSPAMPHNLTRHDGSVI 146
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.5
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 439 GLTIRYNIVSIKNNAFWRIRIWLDMKW 359
GLT++ I + N IWL ++W
Sbjct: 34 GLTLQQIIDVDEKNQLLITNIWLSLEW 60
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.5
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 439 GLTIRYNIVSIKNNAFWRIRIWLDMKW 359
GLT++ I + N IWL ++W
Sbjct: 34 GLTLQQIIDVDEKNQLLITNIWLSLEW 60
>AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan
oxygenase protein.
Length = 228
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/32 (25%), Positives = 15/32 (46%)
Frame = +1
Query: 196 NRGRRCRCHSVFRGCSSVFLHTSHPRYTLSNQ 291
+RG R H +G + + PR++ +Q
Sbjct: 99 SRGERRFSHKALQGAIMITFYRDEPRFSQPHQ 130
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/32 (25%), Positives = 15/32 (46%)
Frame = +1
Query: 196 NRGRRCRCHSVFRGCSSVFLHTSHPRYTLSNQ 291
+RG R H +G + + PR++ +Q
Sbjct: 259 SRGERRFSHKALQGAIMITFYRDEPRFSQPHQ 290
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/32 (25%), Positives = 15/32 (46%)
Frame = +1
Query: 196 NRGRRCRCHSVFRGCSSVFLHTSHPRYTLSNQ 291
+RG R H +G + + PR++ +Q
Sbjct: 259 SRGERRFSHKALQGAIMITFYRDEPRFSQPHQ 290
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = +2
Query: 149 NAPHFAPPSSNLPHNIIGEGDVVAIVSS 232
++ HF S N+ HN D V V +
Sbjct: 3 SSDHFDRESPNIDHNSCSSDDTVLSVGN 30
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 21.0 bits (42), Expect = 8.6
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = -2
Query: 54 LSVMLCIGYYCTSVV 10
L ++LCI Y+C + +
Sbjct: 292 LIILLCIYYFCRAFI 306
>AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein.
Length = 256
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 158 HFAPPSSNLPHNI 196
HF PPS L H I
Sbjct: 34 HFNPPSDKLHHPI 46
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,350
Number of Sequences: 336
Number of extensions: 4198
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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