Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8e06
(544 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37781| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_17945| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_48777| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_47110| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_24089| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_38433| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 29 2.5
SB_14494| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10) 28 5.7
SB_50960| Best HMM Match : Pkinase (HMM E-Value=0) 27 7.5
SB_34278| Best HMM Match : DUF1605 (HMM E-Value=3.6) 27 7.5
SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008) 27 9.9
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 27 9.9
>SB_37781| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 41.5 bits (93), Expect = 4e-04
Identities = 16/40 (40%), Positives = 30/40 (75%)
Frame = +2
Query: 167 FSKAPTVKEIQRQNDRDLRKAGRDLERDKANLEREEKKLL 286
F + T +E+ +QN R L +A RDL+R+++ +E++EKK++
Sbjct: 7 FGRKKTPEEMLKQNQRALNRAMRDLDRERSKMEQQEKKII 46
>SB_17945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +2
Query: 191 EIQRQNDRDLRKAGRDLERDKANLEREEKKL 283
E RQ R L + R+L RDK LER+EK+L
Sbjct: 49 EQMRQQKRQLNRTQRELARDKNALERQEKQL 79
>SB_48777| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 170
Score = 32.7 bits (71), Expect = 0.20
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 200 RQNDRDLRKAGRDLERDKANLEREEKKL 283
RQ R L + R+L RDK LER+EK+L
Sbjct: 2 RQQKRQLNRTQRELARDKNALERQEKQL 29
>SB_47110| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 224
Score = 29.9 bits (64), Expect = 1.4
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 8/50 (16%)
Frame = +2
Query: 164 FFSKAPTVKEIQR---QNDRDL-----RKAGRDLERDKANLEREEKKLLK 289
++ K T KEI+R +N R L RKA R L+++ ANL+R EKK K
Sbjct: 80 YYKKKLTFKEIRRLFRKNVRSLSEKRRRKATRRLKKEIANLKRLEKKSRK 129
>SB_24089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 693
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2
Query: 173 KAPTVKEIQRQNDRDLRKAGRDLE---RDKANLEREEKKLLKPGPAGVATVD 319
K P+VK ++ D+D+ K E + N +++ KKL K GVA+ D
Sbjct: 623 KNPSVKPTEKTKDKDVLKGHESNEFNQQSNKNKQKQFKKLQKQKRKGVASAD 674
>SB_38433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +2
Query: 104 FRNKISKKIPKLYTKETMMNFFSKA-----PTVKEIQRQNDRDLRKAGRDLERDKANLER 268
+ +K + IP + + +N +K P +++ + Q DR+ R+ + +R+K E+
Sbjct: 9 YNDKQVRLIPVVKRRNEAVNRLNKTKEERFPDLRQEREQRDREEREEEKKSQREKRQKEK 68
Query: 269 EEKKLLK 289
EE+K K
Sbjct: 69 EEEKRRK 75
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +2
Query: 122 KKIPKLYTKETMMNFFSKAPTVKEIQRQNDRDLRKAGRD----LERDKANLEREEKKLLK 289
KK K T E + + K+ Q Q D++ +K ++ +ER+K ER +KKL K
Sbjct: 517 KKSKKKLTHEEKLKLAEEEKEKKKQQIQEDKEKKKLQKEKDRAVEREKREKERVQKKLEK 576
>SB_14494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = +2
Query: 107 RNKISKKIPKLYTKETMMNFFSKAPTVKEIQRQNDRDLRKAGRDLERDKANLEREEKKLL 286
R K K + T+ET+ +K E+ +N + +K RD ++ N+E K +
Sbjct: 67 RKKEKKNKKDMETQETLKTNNNKKIEHHELADKNKKSKKKRKRDDNDEENNVESSPCKKV 126
Query: 287 KPGPAGVATVD 319
K G T D
Sbjct: 127 KGSEPGDTTED 137
>SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10)
Length = 574
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 170 SKAPTVKEIQRQNDRDLRKAGRDLERDKANLEREEKKLLKPGPAG 304
+K ++ I+ +N+RD+ G E +K + + E +L KP P G
Sbjct: 322 TKLQRLQPIKDENNRDIEGEGDSSEGEKDDDDDFELQLAKPEPEG 366
>SB_50960| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 632
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1
Query: 394 FFIKRVIKNIKITKKATWWGVGRLIID 314
+ V+KN + T WWG+G LI +
Sbjct: 250 YMAPEVVKNERYTFSPDWWGLGCLIYE 276
>SB_34278| Best HMM Match : DUF1605 (HMM E-Value=3.6)
Length = 243
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 188 KEIQRQNDRDLRKAGRDLERDKANLEREEK 277
++ R DRD R RD ERD+ +R ++
Sbjct: 83 RDRDRDRDRDRRDRDRDKERDRRERDRRDR 112
>SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008)
Length = 832
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +2
Query: 185 VKEIQRQNDRDLRKAGRDLERDKANLEREEKKLLK 289
++++QR+ +R R+ R ER K +LER+ ++ L+
Sbjct: 204 MRQLQRRLERKRRQRLRRQERRKRHLERQRQRYLE 238
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 27.1 bits (57), Expect = 9.9
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +2
Query: 104 FRNKISKKIPKLYTKETMMNFFSKAPTVKEIQRQNDRDLRKAGRDLERDKANLEREEKK 280
F NK S KI + + F + T I R+N D +K G ++ LE E+ K
Sbjct: 733 FENKTSTKIKVINAHFDWLMFCRYSLTRVLIGRRNAFDYKKQGYKFTQEAQKLEEEKDK 791
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,980,493
Number of Sequences: 59808
Number of extensions: 204189
Number of successful extensions: 567
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1239956166
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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