Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8e06
         (544 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457002-1|CAG33283.1|  222|Homo sapiens BC-2 protein.                 41   0.003
BT007298-1|AAP35962.1|  222|Homo sapiens putative breast adenoca...    41   0.003
BC002502-1|AAH02502.1|  222|Homo sapiens chromatin modifying pro...    41   0.003
AY364248-1|AAQ76807.1|  222|Homo sapiens putative breast adenoca...    41   0.003
AJ277113-1|CAC14310.1|  222|Homo sapiens BC-2 protein protein.         41   0.003
AF042384-1|AAC00005.1|  222|Homo sapiens BC-2 protein protein.         41   0.003
CR533456-1|CAG38487.1|  213|Homo sapiens DKFZP564O123 protein.         35   0.21 
BC001553-1|AAH01553.1|  213|Homo sapiens chromatin modifying pro...    35   0.21 
AK222654-1|BAD96374.1|  213|Homo sapiens DKFZP564O123 protein va...    35   0.21 
AF151842-1|AAD34079.1|  213|Homo sapiens CGI-84 protein protein.       35   0.21 
BC035974-1|AAH35974.1|  795|Homo sapiens DEAH (Asp-Glu-Ala-His) ...    31   2.0  
AF279891-1|AAF90182.1|  795|Homo sapiens dead box protein 15 pro...    31   2.0  
AB001636-1|BAA23987.1|  813|Homo sapiens ATP-dependent RNA helic...    31   2.0  
AL390294-1|CAH73142.1|  929|Homo sapiens TAF3 RNA polymerase II,...    29   8.0  
AL353754-1|CAH73451.1|  929|Homo sapiens TAF3 RNA polymerase II,...    29   8.0  
AL159172-1|CAI15661.1|  929|Homo sapiens TAF3 RNA polymerase II,...    29   8.0  
AJ292190-1|CAC34475.1|  727|Homo sapiens TAFII140 protein protein.     29   8.0  

>CR457002-1|CAG33283.1|  222|Homo sapiens BC-2 protein.
          Length = 222

 Score = 40.7 bits (91), Expect = 0.003
 Identities = 17/40 (42%), Positives = 28/40 (70%)
 Frame = +2

Query: 167 FSKAPTVKEIQRQNDRDLRKAGRDLERDKANLEREEKKLL 286
           F +  T +E+ RQN R L +A R+L+R++  LE +EKK++
Sbjct: 5   FGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKII 44


>BT007298-1|AAP35962.1|  222|Homo sapiens putative breast
           adenocarcinoma marker (32kD) protein.
          Length = 222

 Score = 40.7 bits (91), Expect = 0.003
 Identities = 17/40 (42%), Positives = 28/40 (70%)
 Frame = +2

Query: 167 FSKAPTVKEIQRQNDRDLRKAGRDLERDKANLEREEKKLL 286
           F +  T +E+ RQN R L +A R+L+R++  LE +EKK++
Sbjct: 5   FGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKII 44


>BC002502-1|AAH02502.1|  222|Homo sapiens chromatin modifying
           protein 2A protein.
          Length = 222

 Score = 40.7 bits (91), Expect = 0.003
 Identities = 17/40 (42%), Positives = 28/40 (70%)
 Frame = +2

Query: 167 FSKAPTVKEIQRQNDRDLRKAGRDLERDKANLEREEKKLL 286
           F +  T +E+ RQN R L +A R+L+R++  LE +EKK++
Sbjct: 5   FGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKII 44


>AY364248-1|AAQ76807.1|  222|Homo sapiens putative breast
           adenocarcinoma marker protein.
          Length = 222

 Score = 40.7 bits (91), Expect = 0.003
 Identities = 17/40 (42%), Positives = 28/40 (70%)
 Frame = +2

Query: 167 FSKAPTVKEIQRQNDRDLRKAGRDLERDKANLEREEKKLL 286
           F +  T +E+ RQN R L +A R+L+R++  LE +EKK++
Sbjct: 5   FGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKII 44


>AJ277113-1|CAC14310.1|  222|Homo sapiens BC-2 protein protein.
          Length = 222

 Score = 40.7 bits (91), Expect = 0.003
 Identities = 17/40 (42%), Positives = 28/40 (70%)
 Frame = +2

Query: 167 FSKAPTVKEIQRQNDRDLRKAGRDLERDKANLEREEKKLL 286
           F +  T +E+ RQN R L +A R+L+R++  LE +EKK++
Sbjct: 5   FGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKII 44


>AF042384-1|AAC00005.1|  222|Homo sapiens BC-2 protein protein.
          Length = 222

 Score = 40.7 bits (91), Expect = 0.003
 Identities = 17/40 (42%), Positives = 28/40 (70%)
 Frame = +2

Query: 167 FSKAPTVKEIQRQNDRDLRKAGRDLERDKANLEREEKKLL 286
           F +  T +E+ RQN R L +A R+L+R++  LE +EKK++
Sbjct: 5   FGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKII 44


>CR533456-1|CAG38487.1|  213|Homo sapiens DKFZP564O123 protein.
          Length = 213

 Score = 34.7 bits (76), Expect = 0.21
 Identities = 17/43 (39%), Positives = 29/43 (67%)
 Frame = +2

Query: 155 MMNFFSKAPTVKEIQRQNDRDLRKAGRDLERDKANLEREEKKL 283
           M + F K  TV ++ ++ +R+LR   R + RD+A LE++EK+L
Sbjct: 1   MASLFKKR-TVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQL 42


>BC001553-1|AAH01553.1|  213|Homo sapiens chromatin modifying
           protein 2B protein.
          Length = 213

 Score = 34.7 bits (76), Expect = 0.21
 Identities = 17/43 (39%), Positives = 29/43 (67%)
 Frame = +2

Query: 155 MMNFFSKAPTVKEIQRQNDRDLRKAGRDLERDKANLEREEKKL 283
           M + F K  TV ++ ++ +R+LR   R + RD+A LE++EK+L
Sbjct: 1   MASLFKKK-TVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQL 42


>AK222654-1|BAD96374.1|  213|Homo sapiens DKFZP564O123 protein
           variant protein.
          Length = 213

 Score = 34.7 bits (76), Expect = 0.21
 Identities = 17/43 (39%), Positives = 29/43 (67%)
 Frame = +2

Query: 155 MMNFFSKAPTVKEIQRQNDRDLRKAGRDLERDKANLEREEKKL 283
           M + F K  TV ++ ++ +R+LR   R + RD+A LE++EK+L
Sbjct: 1   MASLFKKK-TVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQL 42


>AF151842-1|AAD34079.1|  213|Homo sapiens CGI-84 protein protein.
          Length = 213

 Score = 34.7 bits (76), Expect = 0.21
 Identities = 17/43 (39%), Positives = 29/43 (67%)
 Frame = +2

Query: 155 MMNFFSKAPTVKEIQRQNDRDLRKAGRDLERDKANLEREEKKL 283
           M + F K  TV ++ ++ +R+LR   R + RD+A LE++EK+L
Sbjct: 1   MASLFKKK-TVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQL 42


>BC035974-1|AAH35974.1|  795|Homo sapiens DEAH (Asp-Glu-Ala-His) box
           polypeptide 15 protein.
          Length = 795

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 188 KEIQRQNDRDLRKAGRDLERDKANLEREEKK 280
           K+  R  DR+ R   RD ERD+ + ERE +K
Sbjct: 25  KDRDRDRDREDRSKDRDRERDRGDREREREK 55


>AF279891-1|AAF90182.1|  795|Homo sapiens dead box protein 15
           protein.
          Length = 795

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 188 KEIQRQNDRDLRKAGRDLERDKANLEREEKK 280
           K+  R  DR+ R   RD ERD+ + ERE +K
Sbjct: 25  KDRDRDRDREDRSKDRDRERDRGDREREREK 55


>AB001636-1|BAA23987.1|  813|Homo sapiens ATP-dependent RNA helicase
           #46 protein.
          Length = 813

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 188 KEIQRQNDRDLRKAGRDLERDKANLEREEKK 280
           K+  R  DR+ R   RD ERD+ + ERE +K
Sbjct: 25  KDRDRDRDREDRSKDRDRERDRGDREREREK 55


>AL390294-1|CAH73142.1|  929|Homo sapiens TAF3 RNA polymerase II,
           TATA box binding protein (TBP)-associated factor, 140kD
           protein.
          Length = 929

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = +2

Query: 167 FSKAPTVKEIQRQNDRDLRKAGRDLERDKANLEREEKK 280
           F +   VKE +++ D+  +K  ++ E++K   ERE++K
Sbjct: 690 FEEKEKVKEKEKKKDKKEKKKKKEKEKEKKEKEREKEK 727


>AL353754-1|CAH73451.1|  929|Homo sapiens TAF3 RNA polymerase II,
           TATA box binding protein (TBP)-associated factor, 140kD
           protein.
          Length = 929

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = +2

Query: 167 FSKAPTVKEIQRQNDRDLRKAGRDLERDKANLEREEKK 280
           F +   VKE +++ D+  +K  ++ E++K   ERE++K
Sbjct: 690 FEEKEKVKEKEKKKDKKEKKKKKEKEKEKKEKEREKEK 727


>AL159172-1|CAI15661.1|  929|Homo sapiens TAF3 RNA polymerase II,
           TATA box binding protein (TBP)-associated factor, 140kD
           protein.
          Length = 929

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = +2

Query: 167 FSKAPTVKEIQRQNDRDLRKAGRDLERDKANLEREEKK 280
           F +   VKE +++ D+  +K  ++ E++K   ERE++K
Sbjct: 690 FEEKEKVKEKEKKKDKKEKKKKKEKEKEKKEKEREKEK 727


>AJ292190-1|CAC34475.1|  727|Homo sapiens TAFII140 protein protein.
          Length = 727

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = +2

Query: 167 FSKAPTVKEIQRQNDRDLRKAGRDLERDKANLEREEKK 280
           F +   VKE +++ D+  +K  ++ E++K   ERE++K
Sbjct: 690 FEEKEKVKEKEKKKDKKEKKKKKEKEKEKKEKEREKEK 727


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,649,977
Number of Sequences: 237096
Number of extensions: 937525
Number of successful extensions: 2219
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2213
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)