Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8e04
(640 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 272 1e-73
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 271 3e-73
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 266 8e-72
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 169 1e-42
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 164 5e-41
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 148 4e-36
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 3e-31
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 130 1e-30
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 129 2e-30
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 3e-30
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 128 5e-30
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 127 7e-30
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 126 1e-29
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 100 9e-22
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 2e-21
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 1e-19
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 77 9e-15
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 67 1e-11
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 62 3e-10
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 56 3e-08
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 50 2e-06
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 49 3e-06
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 48 5e-06
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 39 0.003
SB_17996| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_37227| Best HMM Match : Sof1 (HMM E-Value=2.1) 29 3.2
SB_1489| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.77) 29 4.2
SB_6818| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_28358| Best HMM Match : Phosphodiest (HMM E-Value=6.2e-05) 28 7.4
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 27 9.7
SB_35151| Best HMM Match : DUF589 (HMM E-Value=7.5) 27 9.7
SB_24495| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 272 bits (668), Expect = 1e-73
Identities = 123/170 (72%), Positives = 136/170 (80%)
Frame = +2
Query: 131 RMREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKY 310
+MREIVH Q G+CGNQIG+KFWEVISDEHGIDP G Y GDSDLQLERINVYYNEA G KY
Sbjct: 213 KMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKY 272
Query: 311 VPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVVCGASGAGNNWAKGHYTEGADLLETVLDV 490
VPRAVLVDLEP TMDS+R GP+G I+RPDN V G SGAGNNWAKGHYTEGA+L+++VLDV
Sbjct: 273 VPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 332
Query: 491 VRKEAEGCDCLQGFQLVHXXXXXXXXXXXXXXXANLTEEYPDRITATYSV 640
VRKEAE CDCLQGFQL H + + EEYPDRI T+SV
Sbjct: 333 VRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSV 382
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 271 bits (665), Expect = 3e-73
Identities = 122/169 (72%), Positives = 135/169 (79%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYV 313
MREIVH Q G+CGNQIG+KFWEVISDEHGIDP G Y GDSDLQLERINVYYNEA G KYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVVCGASGAGNNWAKGHYTEGADLLETVLDVV 493
PRA+LVDLEP TMDS+R GP+G I+RPDN V G SGAGNNWAKGHYTEGA+L+++VLDVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 494 RKEAEGCDCLQGFQLVHXXXXXXXXXXXXXXXANLTEEYPDRITATYSV 640
RKEAE CDCLQGFQL H + + EEYPDRI T+SV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSV 169
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 266 bits (653), Expect = 8e-72
Identities = 118/169 (69%), Positives = 135/169 (79%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYV 313
MREIV +Q G+CGNQIG+KFWEVISDEHGIDP G Y GDSDLQLERINVYYNEA G KYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVVCGASGAGNNWAKGHYTEGADLLETVLDVV 493
PR+VL+DLEP TMDS+R GP+G I+RPDN V G SGAGNNWAKGHYTEGA+L+++VLDVV
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 494 RKEAEGCDCLQGFQLVHXXXXXXXXXXXXXXXANLTEEYPDRITATYSV 640
RKEAE CDC+QGFQL H + + EEYPDRI T+S+
Sbjct: 121 RKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSI 169
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 169 bits (412), Expect = 1e-42
Identities = 74/91 (81%), Positives = 80/91 (87%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYV 313
MREIVH Q G+CGNQIG+KFWEVISDEHGIDP G Y GDSDLQLERINVYYNEA G KYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 314 PRAVLVDLEPSTMDSIRGGPYGSIYRPDNVV 406
PRA+LVDLEP TMDS+R GP+G I+RPDN V
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFV 91
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 164 bits (399), Expect = 5e-41
Identities = 74/112 (66%), Positives = 84/112 (75%)
Frame = +2
Query: 305 KYVPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVVCGASGAGNNWAKGHYTEGADLLETVL 484
KYVPRAVLVDLEP TMDS+R GP+G I+RPDN V G SGAGNNWAKGHYTEGA+L+++VL
Sbjct: 3 KYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 62
Query: 485 DVVRKEAEGCDCLQGFQLVHXXXXXXXXXXXXXXXANLTEEYPDRITATYSV 640
DVVRKEAE CDC+QGFQL H + EEYPDRI T+SV
Sbjct: 63 DVVRKEAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREEYPDRIMNTFSV 114
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 148 bits (358), Expect = 4e-36
Identities = 62/114 (54%), Positives = 82/114 (71%)
Frame = +2
Query: 299 GAKYVPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVVCGASGAGNNWAKGHYTEGADLLET 478
G +YVPR++LVDLEP TMD++RGGP G+++RPDN V SGA NNWAKGHY+EGA+L++
Sbjct: 12 GGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDN 71
Query: 479 VLDVVRKEAEGCDCLQGFQLVHXXXXXXXXXXXXXXXANLTEEYPDRITATYSV 640
+ DV+RKEAE CDC+QG QL+ + + EEYPDRI + +SV
Sbjct: 72 IFDVLRKEAENCDCMQGVQLIQALGGGTGSGLGTLILSKIREEYPDRILSAFSV 125
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 132 bits (318), Expect = 3e-31
Identities = 59/139 (42%), Positives = 88/139 (63%), Gaps = 2/139 (1%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQL--ERINVYYNEAFGAK 307
MRE + V VG+ G Q+G+ WE+ EHGI P G+ D + + N +++E K
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 308 YVPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVVCGASGAGNNWAKGHYTEGADLLETVLD 487
+VPRAV DLEP+ +D +R G Y ++ P+ ++ G A NN+A+GHYT G ++++TVLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 488 VVRKEAEGCDCLQGFQLVH 544
+RK A+GC LQGF + H
Sbjct: 121 RLRKLADGCTGLQGFLIFH 139
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 130 bits (313), Expect = 1e-30
Identities = 59/139 (42%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQL--ERINVYYNEAFGAK 307
MRE + + VG+ G QIG+ WE+ EHGI P G+ D + + N +++E K
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 308 YVPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVVCGASGAGNNWAKGHYTEGADLLETVLD 487
+VPRAV VDLEP+ +D +R G Y ++ P+ +V G A NN+A+GHYT G ++++ VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 488 VVRKEAEGCDCLQGFQLVH 544
+RK A+ C LQGF + H
Sbjct: 121 RIRKLADQCTGLQGFLIFH 139
Score = 127 bits (307), Expect = 7e-30
Identities = 57/138 (41%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Frame = +2
Query: 137 REIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQL--ERINVYYNEAFGAKY 310
RE + + VG+ G QIG+ WE+ EHGI P G+ D + + N +++E K+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 311 VPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVVCGASGAGNNWAKGHYTEGADLLETVLDV 490
VPRAV VDLEP+ +D +R G Y ++ P+ ++ G A NN+A+GHYT G ++++ VLD
Sbjct: 495 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDR 554
Query: 491 VRKEAEGCDCLQGFQLVH 544
+RK A+ C LQGF + H
Sbjct: 555 IRKLADQCTGLQGFLIFH 572
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 129 bits (311), Expect = 2e-30
Identities = 58/139 (41%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQL--ERINVYYNEAFGAK 307
+RE + + VG+ G QIG+ WE+ EHGI P G+ D + + N +++E K
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 308 YVPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVVCGASGAGNNWAKGHYTEGADLLETVLD 487
+VPRAV VDLEP+ +D +R G Y ++ P+ ++ G A NN+A+GHYT G +L++ VLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 488 VVRKEAEGCDCLQGFQLVH 544
+RK A+ C LQGF + H
Sbjct: 706 RIRKLADQCTGLQGFLIFH 724
Score = 127 bits (307), Expect = 7e-30
Identities = 58/138 (42%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Frame = +2
Query: 137 REIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQL--ERINVYYNEAFGAKY 310
RE + V VG+ G QIG+ WE+ EHGI P G+ D + + N +++E K+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 311 VPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVVCGASGAGNNWAKGHYTEGADLLETVLDV 490
VPRAV VDLEP+ +D +R G Y ++ P+ ++ G A NN+A+GHYT G ++++ VLD
Sbjct: 126 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 185
Query: 491 VRKEAEGCDCLQGFQLVH 544
+RK A+ C LQGF + H
Sbjct: 186 IRKLADQCTGLQGFLIFH 203
Score = 64.5 bits (150), Expect = 7e-11
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +2
Query: 137 REIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDL--QLERINVYYNEAFGAKY 310
RE + + VG+ G QIG+ WE+ EHGI P G+ D + + N +++E K+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 311 VPRAVLVDLEPSTMDSI 361
VPRAV VDLEP+ + I
Sbjct: 574 VPRAVFVDLEPTVRECI 590
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 128 bits (310), Expect = 3e-30
Identities = 60/138 (43%), Positives = 85/138 (61%), Gaps = 2/138 (1%)
Frame = +2
Query: 137 REIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQL--ERINVYYNEAFGAKY 310
RE V + VG+ G Q+G+ WE+ EHGI P G+ D + + N +++E K+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 311 VPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVVCGASGAGNNWAKGHYTEGADLLETVLDV 490
VPRAV VDLEPS +D IR G Y ++ P+ ++ G A NN+A+GHYT G D ++ VLD
Sbjct: 480 VPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDR 539
Query: 491 VRKEAEGCDCLQGFQLVH 544
+RK A+ C LQGF + H
Sbjct: 540 IRKLADQCSGLQGFLVFH 557
Score = 111 bits (268), Expect = 3e-25
Identities = 51/124 (41%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Frame = +2
Query: 179 IGSKFWEVISDEHGIDPCGRYQGDSDLQL--ERINVYYNEAFGAKYVPRAVLVDLEPSTM 352
+G+ WE+ EHGI P G+ D + + N +++E K+VPRAV DLEP+ +
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 353 DSIRGGPYGSIYRPDNVVCGASGAGNNWAKGHYTEGADLLETVLDVVRKEAEGCDCLQGF 532
D +R G Y ++ P+ ++ G A NN+A+GHYT G L+E VLD +RK A+ C LQGF
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGF 120
Query: 533 QLVH 544
+ H
Sbjct: 121 LIFH 124
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 128 bits (308), Expect = 5e-30
Identities = 57/138 (41%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Frame = +2
Query: 137 REIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQL--ERINVYYNEAFGAKY 310
RE + + VG+ G QIG+ WE+ EHGI P G+ D + + N +++E K+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 311 VPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVVCGASGAGNNWAKGHYTEGADLLETVLDV 490
VPRAV VDLEP+ +D +R G Y ++ P+ ++ G A NN+A+GHYT G ++++ VLD
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 491 VRKEAEGCDCLQGFQLVH 544
+RK A+ C LQGF + H
Sbjct: 121 IRKLADQCTGLQGFLIFH 138
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 127 bits (307), Expect = 7e-30
Identities = 58/138 (42%), Positives = 85/138 (61%), Gaps = 2/138 (1%)
Frame = +2
Query: 137 REIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQL--ERINVYYNEAFGAKY 310
RE + + VG+ G QIG+ WE+ EHGI P G+ D + + N ++ E K+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 311 VPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVVCGASGAGNNWAKGHYTEGADLLETVLDV 490
VPRAV VDLEP+ +D +R G Y ++ P+ ++ G A NN+A+GHYT G + ++ VLD
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 491 VRKEAEGCDCLQGFQLVH 544
+RK A+GC LQGF + H
Sbjct: 493 LRKLADGCTGLQGFLIFH 510
Score = 125 bits (302), Expect = 3e-29
Identities = 56/138 (40%), Positives = 85/138 (61%), Gaps = 2/138 (1%)
Frame = +2
Query: 137 REIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQL--ERINVYYNEAFGAKY 310
RE + V VG+ G Q+G+ WE+ EHGI P G+ D + + N +++E K+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 311 VPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVVCGASGAGNNWAKGHYTEGADLLETVLDV 490
VPRAV DLEP+ +D +R G Y ++ P+ ++ G A NN+A+GHYT G ++++ VLD
Sbjct: 866 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDR 925
Query: 491 VRKEAEGCDCLQGFQLVH 544
+RK A+ C LQGF + H
Sbjct: 926 IRKLADQCTGLQGFLIFH 943
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 126 bits (305), Expect = 1e-29
Identities = 57/139 (41%), Positives = 86/139 (61%), Gaps = 2/139 (1%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQL--ERINVYYNEAFGAK 307
MRE + + VG+ G Q+G+ WE+ EHGI P G+ D + + N +++E K
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 308 YVPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVVCGASGAGNNWAKGHYTEGADLLETVLD 487
+VPRAV VDLEP+ +D +R G Y ++ P+ ++ G A NN+A+GHYT G ++++ VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 488 VVRKEAEGCDCLQGFQLVH 544
RK A+ C LQGF + H
Sbjct: 121 RCRKLADQCTGLQGFLIFH 139
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 100 bits (240), Expect = 9e-22
Identities = 54/139 (38%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQL--ERINVYYNEAFGAK 307
MRE + + VG+ G QIG+ WE+ EHGI P G+ D + N +++E K
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 308 YVPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVVCGASGAGNNWAKGHYTEGADLLETVLD 487
+VPRAV VDLEP+ + P+ ++ G A NN+A+GHYT G ++ VLD
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 488 VVRKEAEGCDCLQGFQLVH 544
+RK A+ C LQGF + H
Sbjct: 111 RLRKLADQCSGLQGFFIFH 129
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 99.5 bits (237), Expect = 2e-21
Identities = 42/86 (48%), Positives = 59/86 (68%)
Frame = +2
Query: 287 NEAFGAKYVPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVVCGASGAGNNWAKGHYTEGAD 466
+EA KYVPRAVLVDLEP+ +D +R G Y +Y P+ ++ G A NN+A+GHYT G +
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 467 LLETVLDVVRKEAEGCDCLQGFQLVH 544
++E V+D +RK + C LQGF + H
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGFLIFH 1050
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 93.9 bits (223), Expect = 1e-19
Identities = 40/93 (43%), Positives = 59/93 (63%)
Frame = +2
Query: 266 ERINVYYNEAFGAKYVPRAVLVDLEPSTMDSIRGGPYGSIYRPDNVVCGASGAGNNWAKG 445
+ N ++ E K+VPRAV VDLEP+ +D IR G Y ++ P+ ++ G A NN+A+G
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARG 71
Query: 446 HYTEGADLLETVLDVVRKEAEGCDCLQGFQLVH 544
HYT G + ++ LD +RK A+ C LQGF + H
Sbjct: 72 HYTVGKEHIDLALDRIRKLADQCTGLQGFLIFH 104
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 77.4 bits (182), Expect = 9e-15
Identities = 32/75 (42%), Positives = 47/75 (62%)
Frame = +2
Query: 416 SGAGNNWAKGHYTEGADLLETVLDVVRKEAEGCDCLQGFQLVHXXXXXXXXXXXXXXXAN 595
+ A NNWAKG YTEGA+L+++ +D +RK AE CD +QGFQ+ H +
Sbjct: 3 NSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLSK 62
Query: 596 LTEEYPDRITATYSV 640
+ EEYPDR+ +++ V
Sbjct: 63 IREEYPDRLVSSFCV 77
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 70.5 bits (165), Expect = 1e-12
Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGDSDLQ--LERINVYYNEAFGAK 307
MRE + V VG+ G QIG+ WE+ EHGI P G+ D + + N +++E G K
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 308 YVPRAVLVDLEPSTMDSIR 364
+VPRAV VDLEPS + ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 69.7 bits (163), Expect = 2e-12
Identities = 28/64 (43%), Positives = 42/64 (65%)
Frame = +2
Query: 353 DSIRGGPYGSIYRPDNVVCGASGAGNNWAKGHYTEGADLLETVLDVVRKEAEGCDCLQGF 532
D +R G Y ++ P+ ++ G A NN+A+GHYT G +L++ VLD +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 533 QLVH 544
+ H
Sbjct: 73 LIFH 76
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 67.3 bits (157), Expect = 1e-11
Identities = 27/62 (43%), Positives = 41/62 (66%)
Frame = +2
Query: 359 IRGGPYGSIYRPDNVVCGASGAGNNWAKGHYTEGADLLETVLDVVRKEAEGCDCLQGFQL 538
+R G Y ++ P+ ++ G A NN+A+GHYT G +L++ VLD +RK A+ C LQGF +
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 539 VH 544
H
Sbjct: 63 FH 64
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/62 (41%), Positives = 39/62 (62%)
Frame = +2
Query: 359 IRGGPYGSIYRPDNVVCGASGAGNNWAKGHYTEGADLLETVLDVVRKEAEGCDCLQGFQL 538
IR G Y ++ P+ ++ G A NN+A+GHYT G + ++ LD +RK A+ C LQGF +
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 539 VH 544
H
Sbjct: 63 FH 64
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 55.6 bits (128), Expect = 3e-08
Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Frame = +2
Query: 143 IVHVQVGRCGNQIGSKFWE-VISDEHGIDP---CGRYQGDSDLQLERINV--YYNEAFGA 304
IV +Q+G+CGNQIG + ++ ++ D ++ C S + E ++ ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVEDATKLNSRFLCKELTTRSCTEYEEESLARFFTRENDD 62
Query: 305 KYVPRAVLVDLEPSTMDSIRGGPYGS---IYRPDNVVCGASGAGNNWAKGHYTEGADLLE 475
RAV +D+E + S Y G+GNNWA G G ++
Sbjct: 63 ILNARAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSID 122
Query: 476 TVLDVVRKEAEGCDCLQGF 532
VLD+V++E E CD L GF
Sbjct: 123 KVLDLVQREVEKCDRLDGF 141
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 53.6 bits (123), Expect = 1e-07
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = +2
Query: 359 IRGGPYGSIYRPDNVVCGASGAGNNWAKGHYTEGADLLETVLDVVRK 499
+R G Y ++ P+ ++ G A NN+A+GHYT G +L++ VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
Frame = +2
Query: 317 RAVLVDLEPSTMDSIR--GGPYGSIYRPDNVVCGASGAGNNWAKGHYTE-----GADLLE 475
R V VD E + S R G +G R N++ G G GNN+A G++ G LL
Sbjct: 40 RCVCVDSESKVIASNRRSDGVHGQ-NRDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLH 98
Query: 476 TVLDVVRKEAEGCDCLQGFQLVHXXXXXXXXXXXXXXXANLTEEYP 613
+D +RKE E CD G ++H L++ YP
Sbjct: 99 MTMDAMRKEVERCDSFAGTIVMHSLTGGTGSGLGARLVETLSDAYP 144
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +2
Query: 359 IRGGPYGSIYRPDNVVCGASGAGNNWAKGHYTEGADLLETVLDVVRK 499
+R G Y ++ PD ++ G A NN+A+GHYT G + ++ L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/50 (46%), Positives = 29/50 (58%)
Frame = +2
Query: 491 VRKEAEGCDCLQGFQLVHXXXXXXXXXXXXXXXANLTEEYPDRITATYSV 640
+RKEAE CD +QGFQL+H +L EEYPDRI ++ SV
Sbjct: 1 MRKEAEDCDAIQGFQLLHSLGGGTGSGLGTLILYHLQEEYPDRILSSVSV 50
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/35 (54%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Frame = +2
Query: 191 FWEVISDEHGIDPCGRYQG-DSDLQLERINVYYNE 292
FWEVI++EHGIDP G+ S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDEHGIDPCGRYQGD--SDLQLERINVYYNEAFGAK 307
MRE + + VG+ G QIG+ WE+ EHGI P G D +D + + +++E K
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASGK 255
Query: 308 Y 310
+
Sbjct: 256 H 256
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 317 RAVLVDLEPSTMDSIRGGPYGSIYRPDNVVCGASGAGNNW 436
RAVL+D+E +++I GP ++ ++ SG GNNW
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_17996| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -1
Query: 202 HFPKLRANLVPTSPDLYVNYFSHSRVLITKNLSKI 98
H + N++P+SP Y +Y+ +IT N+S +
Sbjct: 483 HITIITINILPSSPSTYHHYYHQHITIITINISPL 517
>SB_37227| Best HMM Match : Sof1 (HMM E-Value=2.1)
Length = 232
Score = 29.1 bits (62), Expect = 3.2
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Frame = -1
Query: 322 SSRNIFSSKCFVVVDIDPLELQIRVSLV----AATGVDSVLVRYHFPKLRANL---VPTS 164
S NI S+K + IDPL ++++ A T D Y P +A +P +
Sbjct: 19 SLSNIKSNKEKQKLKIDPLNKKLKIPYKEKRSANTSQDISRYLYSDPAGKAKQEKKIPMN 78
Query: 163 PDLYVNYFSHSRVLITKNLSKIIVEEPNI 77
P L N HS L L ++ PN+
Sbjct: 79 PPLLANIHKHSTPLCPNRLKDVLRHSPNM 107
>SB_1489| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.77)
Length = 872
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 365 GGPYGSIYRPDNVVCGASGAGNNWAKGHYTEG 460
GG Y D+ G + G N+A G+YT+G
Sbjct: 83 GGNYADGNHDDSNYAGGNYTGGNYADGNYTDG 114
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 365 GGPYGSIYRPDNVVCGASGAGNNWAKGHYTEG 460
GG Y D+ G + G N+A G+YT+G
Sbjct: 229 GGNYADGNHDDSNYAGGNYTGGNYADGNYTDG 260
>SB_6818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1784
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 274 DPLELQIRVSLVAATGVDSVLVRYHFPKLRANLVPT 167
DP +I + ATG+ + VRY P +R N +PT
Sbjct: 1038 DPFTFEINSRITGATGLHFIGVRY-IPLIRNNGLPT 1072
>SB_28358| Best HMM Match : Phosphodiest (HMM E-Value=6.2e-05)
Length = 425
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 242 GSGHRGRFRARQISLPKTSSQSGSHISRPVRELFLSF 132
G G+ RF RQ + ++ +G H++R V+ +SF
Sbjct: 61 GPGYGSRFTDRQNDFSRFTAHNGRHVARRVKNGQISF 97
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 27.5 bits (58), Expect = 9.7
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 134 MREIVHVQVGRCGNQIGSKFWEVISDE---HGIDPCGRYQGDSDLQLERINVYYNEAFGA 304
+RE++ +Q G N +G+ +W + G P D L E + V E
Sbjct: 27 VREVITLQFGHYANFVGTHWWNIQESSFCYDGASPKSEINHDC-LFREGLTVTGQET--- 82
Query: 305 KYVPRAVLVDLEPS 346
Y PR +L DL+ S
Sbjct: 83 -YTPRLLLYDLKGS 95
>SB_35151| Best HMM Match : DUF589 (HMM E-Value=7.5)
Length = 297
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -1
Query: 328 KNSSRNIFSSKCFVVVDIDPLELQIRVSLVAATGVDSVLVRYHFPKL 188
K + N+ SS VVD+DPL +Q++ D V +R+ P L
Sbjct: 185 KTIAENVDSS---AVVDVDPLRMQVKAPEDFQLPEDGVYIRWPDPPL 228
>SB_24495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 480 SSMWSERKRKAAIACKASN*SILLEEVQDQAWALCCSLT-*PKNTQIELRPH 632
S++ S +KAA++C ++ +E+ ++ + CC L+ N +ELR H
Sbjct: 73 STLDSRANQKAAVSCVEQMKNLNVEDERETSSQACCVLSEGTGNGYVELRAH 124
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,585,304
Number of Sequences: 59808
Number of extensions: 326704
Number of successful extensions: 966
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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