Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8e03
         (658 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110500-3|CAB54483.1|  493|Caenorhabditis elegans Hypothetical ...   172   2e-43
Z68302-4|CAB54515.1|  521|Caenorhabditis elegans Hypothetical pr...    62   3e-10
U23514-7|AAC46539.3|  493|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z81513-1|CAB04174.1|  346|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U40412-4|AAV28342.1|  618|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U88178-3|AAC24414.1|  305|Caenorhabditis elegans Yeast glc seven...    29   3.8  
U88169-1|AAB42233.1|  305|Caenorhabditis elegans Yeast glc seven...    29   3.8  
Z69904-5|CAA93778.1|  250|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z81516-6|CAB04206.1|  524|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z75535-5|CAA99829.1|  524|Caenorhabditis elegans Hypothetical pr...    27   8.9  
U40802-10|AAK19008.2|  374|Caenorhabditis elegans Hypothetical p...    27   8.9  

>AL110500-3|CAB54483.1|  493|Caenorhabditis elegans Hypothetical
           protein Y87G2A.3 protein.
          Length = 493

 Score =  172 bits (419), Expect = 2e-43
 Identities = 74/137 (54%), Positives = 100/137 (72%)
 Frame = +2

Query: 248 LDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLRCGQMVLGVALVRVHLSVDWVW 427
           ++ +++ +TS  W TYR+ F PIG  G ++D+GWGCMLRC QM+LG  L+R H+   + W
Sbjct: 50  IEAMKKYVTSRFWFTYRRDFSPIGGTGPSTDQGWGCMLRCAQMLLGEVLLRRHIGRHFEW 109

Query: 428 SPETRDPTYLKIIQRFEERKQAPYSIHQVALMGASEGKEVGQWFGPNTIAQVLKKLTVYD 607
             E     Y KI+Q F + K A YSIHQ+A MG +EGKEV +WFGPNT AQV+KKLT++D
Sbjct: 110 DIEKTSEIYEKILQMFFDEKDALYSIHQIAQMGVTEGKEVSKWFGPNTAAQVMKKLTIFD 169

Query: 608 KWSSLAIHVALDNTVVK 658
            WS++A+HVALDN +VK
Sbjct: 170 DWSNIAVHVALDNILVK 186


>Z68302-4|CAB54515.1|  521|Caenorhabditis elegans Hypothetical
           protein ZK792.8 protein.
          Length = 521

 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 18/127 (14%)
 Frame = +2

Query: 266 DITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLRCGQMVLGVALVRVHLSVDWVWSPETR- 442
           D  S +W TYR  F  + D   T+D GWGCM+R  QM++  A++      DW ++   R 
Sbjct: 174 DYYSRLWITYRTDFPALLDTDTTTDCGWGCMIRTTQMMVAQAIMVNRFGRDWRFTRRKRS 233

Query: 443 -----------DPTYLK---IIQRFEERKQAPYSIHQ---VALMGASEGKEVGQWFGPNT 571
                      D   ++   I++ FE++  AP  IH+   +A MG  + K VG W+ P+ 
Sbjct: 234 HVAAHGDEDDFDREKIQEWMILKLFEDKPTAPLGIHKMVGIAAMGKGK-KAVGSWYSPSE 292

Query: 572 IAQVLKK 592
              ++KK
Sbjct: 293 AVFIMKK 299


>U23514-7|AAC46539.3|  493|Caenorhabditis elegans Hypothetical
           protein F48E8.3 protein.
          Length = 493

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 20/55 (36%), Positives = 23/55 (41%)
 Frame = -2

Query: 411 DKCTLTRATPNTICPHRNIQPHPLSEVKPSSPIGTKPFLYVHHIIDVISLLIRSK 247
           D   + RA    I    NIQ HP + V P  P     FL    I    +LLI SK
Sbjct: 237 DGVKIARALGAKIIGMENIQIHPTAFVDPKDPSAGTKFLAAEAIRGKGALLINSK 291


>Z81513-1|CAB04174.1|  346|Caenorhabditis elegans Hypothetical
           protein F26D2.1 protein.
          Length = 346

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 3   FLRSIHSRCVSYSNSYHVFYLNIFYCFNIFPYY 101
           FL S  S C S++ ++ V YL +FY   +F  Y
Sbjct: 8   FLISKLSFCASFTLNFFVIYLTLFYIERVFETY 40


>U40412-4|AAV28342.1|  618|Caenorhabditis elegans Hypothetical
           protein F46G11.1 protein.
          Length = 618

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +3

Query: 57  FYLNIFYCFNIFPYY 101
           ++LNIF+CF + PYY
Sbjct: 601 YFLNIFFCFFLSPYY 615


>U88178-3|AAC24414.1|  305|Caenorhabditis elegans Yeast glc
           seven-like phosphatasesprotein 3 protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 571 CIRSKPLANFFSFRGTHQCHLMDRI 497
           C + K   NFF  RG H+C  ++R+
Sbjct: 107 CFKIKYPENFFMLRGNHECPAINRV 131


>U88169-1|AAB42233.1|  305|Caenorhabditis elegans Yeast glc
           seven-like phosphatasesprotein 4 protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 571 CIRSKPLANFFSFRGTHQCHLMDRI 497
           C + K   NFF  RG H+C  ++R+
Sbjct: 107 CFKIKYPENFFMLRGNHECPAINRV 131


>Z69904-5|CAA93778.1|  250|Caenorhabditis elegans Hypothetical
           protein ZK20.5 protein.
          Length = 250

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 221 FYKIFISVYLDRIRRDITSII 283
           FY IFI + LD IRR+I + I
Sbjct: 156 FYTIFIRIMLDTIRREIATSI 176


>Z81516-6|CAB04206.1|  524|Caenorhabditis elegans Hypothetical
           protein F26H9.1 protein.
          Length = 524

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 18/63 (28%), Positives = 30/63 (47%)
 Frame = +2

Query: 455 LKIIQRFEERKQAPYSIHQVALMGASEGKEVGQWFGPNTIAQVLKKLTVYDKWSSLAIHV 634
           L ++   E  +  P S    AL+     K V  W   NTI  +++++T Y    S++  V
Sbjct: 356 LSVVTSEEAEELKPLSRAMCALIQCRNLKHVLPW-SKNTIFNLMEEITTYPNPWSMSTFV 414

Query: 635 ALD 643
           AL+
Sbjct: 415 ALN 417


>Z75535-5|CAA99829.1|  524|Caenorhabditis elegans Hypothetical
           protein F26H9.1 protein.
          Length = 524

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 18/63 (28%), Positives = 30/63 (47%)
 Frame = +2

Query: 455 LKIIQRFEERKQAPYSIHQVALMGASEGKEVGQWFGPNTIAQVLKKLTVYDKWSSLAIHV 634
           L ++   E  +  P S    AL+     K V  W   NTI  +++++T Y    S++  V
Sbjct: 356 LSVVTSEEAEELKPLSRAMCALIQCRNLKHVLPW-SKNTIFNLMEEITTYPNPWSMSTFV 414

Query: 635 ALD 643
           AL+
Sbjct: 415 ALN 417


>U40802-10|AAK19008.2|  374|Caenorhabditis elegans Hypothetical
           protein ZC477.2 protein.
          Length = 374

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +2

Query: 26  MCILFQFISCFLSKYILL 79
           +C+LF F  CF  KYILL
Sbjct: 141 ICLLFAFKICFPQKYILL 158


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,013,540
Number of Sequences: 27780
Number of extensions: 358261
Number of successful extensions: 955
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)