Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8e01
         (628 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_32780| Best HMM Match : SAICAR_synt (HMM E-Value=0)                197   5e-51
SB_21014| Best HMM Match : SAICAR_synt (HMM E-Value=2.2e-28)          125   3e-29
SB_23845| Best HMM Match : IL6 (HMM E-Value=1.2)                       29   4.1  
SB_37497| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_29939| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_54236| Best HMM Match : bZIP_1 (HMM E-Value=1.1)                    28   7.1  
SB_22826| Best HMM Match : F5_F8_type_C (HMM E-Value=7.9e-09)          27   9.4  

>SB_32780| Best HMM Match : SAICAR_synt (HMM E-Value=0)
          Length = 278

 Score =  197 bits (481), Expect = 5e-51
 Identities = 97/181 (53%), Positives = 124/181 (68%), Gaps = 4/181 (2%)
 Frame = +3

Query: 96  KLGKLLIEGKTKQVFDVPDQP--GYCLLLNKDRITAGDGVKAHDLEGKAAISNQTNAKVF 269
           K+G+ +IEGKTK V+ +PD P   + LL +KD+ITA D  +  ++ GKAA S  T   +F
Sbjct: 2   KIGEKIIEGKTKIVYALPDSPDGNHVLLKSKDKITAFDATRKDEMSGKAAQSTATTCAIF 61

Query: 270 EILKSAGIKTAFVKIASET--AFLSKKCEMIPIEWVTRRLATGSFLKRNPGVPEGFRFTP 443
           E+LK+ G+KT FVK       AF+   CEMIP+E V RR+ATGSFLKR PGV EG+RFTP
Sbjct: 62  EMLKACGLKTHFVKRCESDPEAFIGIACEMIPLEVVCRRIATGSFLKRYPGVKEGYRFTP 121

Query: 444 PKQETFFKDDANHDPQWSEEQIISAKFNYNGLLIGRDEVDYMRKATILIFEILEKAWALR 623
           PKQE F KDDA HDP W+ EQ + A F   G  IG+ E+D M ++ I IFEI+E+AWA  
Sbjct: 122 PKQEFFLKDDAQHDPFWTYEQCVEAAFEIGGRKIGKHELDIMSESAIAIFEIIERAWATV 181

Query: 624 D 626
           D
Sbjct: 182 D 182


>SB_21014| Best HMM Match : SAICAR_synt (HMM E-Value=2.2e-28)
          Length = 265

 Score =  125 bits (302), Expect = 3e-29
 Identities = 57/92 (61%), Positives = 68/92 (73%)
 Frame = +3

Query: 351 MIPIEWVTRRLATGSFLKRNPGVPEGFRFTPPKQETFFKDDANHDPQWSEEQIISAKFNY 530
           MIP+E V RR+ATGSFLKR PGV EG+RFTPPKQE F KDDA HDP W+ EQ + A F  
Sbjct: 1   MIPLEVVCRRIATGSFLKRYPGVKEGYRFTPPKQEFFLKDDAQHDPFWTYEQCVEAAFEI 60

Query: 531 NGLLIGRDEVDYMRKATILIFEILEKAWALRD 626
            G  IG+ E+D M ++ I IFEI+E+AWA  D
Sbjct: 61  GGRKIGKHELDIMSESAIAIFEIIERAWATVD 92


>SB_23845| Best HMM Match : IL6 (HMM E-Value=1.2)
          Length = 1388

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +3

Query: 57   IAKMSHPKQVGQYKLGKLLIEGKTKQVFDVPDQPGYCLLLNK 182
            I K + P++  Q K  KLL+   T +  ++PD+    L+LNK
Sbjct: 1240 IKKRTEPQESDQKKQCKLLLAASTLKHRNLPDENAVGLVLNK 1281


>SB_37497| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 97

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 11/53 (20%), Positives = 24/53 (45%)
 Frame = -1

Query: 562 STSSRPIRRPL*LNLAEMICSSDHWGSWFASSLKNVSCFGGVNLKPSGTPGFL 404
           S   +P+   + ++  E +CSS  W  +   ++  ++   G  L+    PG +
Sbjct: 14  SLKGKPVPESVYVDAIEGVCSSKSWEDYGIKTVNGINRISGEGLEAKDVPGMM 66


>SB_29939| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1122

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +3

Query: 3    SRDPHRIGSSLHSYL-RSKIAKMSHPKQVGQYKLGKLLI 116
            S  P  +GSS  S L R+ +A  +HP+  G Y L +L+I
Sbjct: 965  SDHPRYLGSSSSSSLPRNILATSAHPRYHGSYLLSQLII 1003


>SB_54236| Best HMM Match : bZIP_1 (HMM E-Value=1.1)
          Length = 1188

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +3

Query: 9    DPHRIGSSLHSYLRSKIAKMSHPKQVGQYKLGKLLIEGKTKQ-VFDVPDQP 158
            DP+ +G + H +  S +A ++HPK    +K  +   +  TK+    +PD P
Sbjct: 1107 DPNHVGGNHHEHCSSILALLTHPK--NSFKHIEKKTKAPTKEGGVRIPDSP 1155


>SB_22826| Best HMM Match : F5_F8_type_C (HMM E-Value=7.9e-09)
          Length = 1296

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +3

Query: 462 FKDDANHDPQW 494
           F DDA HDPQW
Sbjct: 772 FTDDAGHDPQW 782


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,707,825
Number of Sequences: 59808
Number of extensions: 460429
Number of successful extensions: 1309
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)