Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8e01
         (628 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   2.6  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    25   2.6  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   6.0  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   6.0  
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    23   6.0  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 130 NRYSMFRTNLGTACFLTRTESPQAMVSKPTIW 225
           NR  ++ TN G    +     PQ  V  PT+W
Sbjct: 590 NRVLLYETNEGNRERVVTAGVPQGSVLGPTLW 621


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +1

Query: 130 NRYSMFRTNLGTACFLTRTESPQAMVSKPTIW 225
           NR  M+ T  G A     +  PQ  V  PT+W
Sbjct: 585 NRVLMYDTTDGPAEIAVTSGVPQGSVLGPTLW 616


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 9   DPHRIGSSLHSYLR-SKIAKMSHPKQVGQYK 98
           D HR+G+++ +YL+  KI   + P+  G  K
Sbjct: 151 DKHRLGTAIAAYLQYQKICGSNIPQASGHSK 181


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 3/101 (2%)
 Frame = +3

Query: 141 DVPDQPGYCLLLNKDRITAGDGVKAHDLEGKAAISNQTNAKVFEILKSAGIKTAFVKIAS 320
           D P  PG  L   ++       V   +L   A+  N   A   + + +A +  A  K   
Sbjct: 399 DWPASPGQVLERGEEEPVRD--VNEQELLDIASSLNPRKAPGLDGVPNAALTAAIRKHTD 456

Query: 321 ETAFLSKKC---EMIPIEWVTRRLATGSFLKRNPGVPEGFR 434
               L ++C   E  P EW  ++LA      + PG+   FR
Sbjct: 457 IFKKLFQECLDNERFPDEWKKQKLALIPKPGKPPGLASSFR 497


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = +3

Query: 9   DPHRIGSSLHSYLRSKIAKMSHPKQVGQYKLGKLLIEGKTK 131
           D  RI ++   +L  ++A MSH + +  ++     ++GK K
Sbjct: 84  DVQRIRTNFKGHLLLELAPMSHQETMTLWREVAAALDGKAK 124


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,542
Number of Sequences: 2352
Number of extensions: 15759
Number of successful extensions: 79
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)