Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8d24
         (581 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3HY99 Cluster: Putative uncharacterized protein; n=1; ...    35   1.6  
UniRef50_A6SDE5 Cluster: Putative uncharacterized protein; n=1; ...    35   1.6  
UniRef50_Q4K2S0 Cluster: Putative glycosyl transferase; n=3; Str...    34   2.1  
UniRef50_A2G376 Cluster: Putative uncharacterized protein; n=1; ...    33   3.7  
UniRef50_Q97KD0 Cluster: General secretion family related protei...    33   6.5  
UniRef50_Q3JAZ6 Cluster: Putative uncharacterized protein; n=1; ...    33   6.5  
UniRef50_Q5AWQ8 Cluster: Putative uncharacterized protein; n=1; ...    33   6.5  

>UniRef50_A3HY99 Cluster: Putative uncharacterized protein; n=1;
            Algoriphagus sp. PR1|Rep: Putative uncharacterized
            protein - Algoriphagus sp. PR1
          Length = 9449

 Score = 34.7 bits (76), Expect = 1.6
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = +3

Query: 351  GTQNDKTFTEHKPAVSTDYSTFSKLL--PSYDGSSRTLVFYIDSENVDNALNLIANSEDP 524
            GT  +KT +E  PA S    T  K    P+Y+ +S+T+ +    EN  N        +DP
Sbjct: 3946 GTLPEKTDSETVPATSNPSWTLDKSASQPTYNSASQTITYTFVLENTGNVTISNIVLDDP 4005

Query: 525  NIT 533
            N+T
Sbjct: 4006 NVT 4008


>UniRef50_A6SDE5 Cluster: Putative uncharacterized protein; n=1;
            Botryotinia fuckeliana B05.10|Rep: Putative
            uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 3936

 Score = 34.7 bits (76), Expect = 1.6
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = +3

Query: 351  GTQNDKTFTE-HKPAVSTDYSTFSKLLPSYDGSSRTLVFYIDSENVDNALNLIANSEDPN 527
            GT + + +++   PA++ D++   ++ P  DGS R    Y D    D +  L+       
Sbjct: 1267 GTNHSELWSKVDYPAMANDFAVMIEIWPEVDGSLRLRATYTDEFLNDESATLMLQQFSDL 1326

Query: 528  ITFLIRN 548
            I+F+IRN
Sbjct: 1327 ISFVIRN 1333


>UniRef50_Q4K2S0 Cluster: Putative glycosyl transferase; n=3;
           Streptococcus pneumoniae|Rep: Putative glycosyl
           transferase - Streptococcus pneumoniae
          Length = 308

 Score = 34.3 bits (75), Expect = 2.1
 Identities = 15/44 (34%), Positives = 30/44 (68%)
 Frame = +3

Query: 420 KLLPSYDGSSRTLVFYIDSENVDNALNLIANSEDPNITFLIRNK 551
           ++L S++ + + +V  +D+ + DN++ L+ N EDP  TFLI ++
Sbjct: 29  EILRSFNMNFKIIV--VDNNSTDNSIELLKNIEDPQTTFLISDE 70


>UniRef50_A2G376 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 481

 Score = 33.5 bits (73), Expect = 3.7
 Identities = 24/69 (34%), Positives = 33/69 (47%)
 Frame = +3

Query: 357 QNDKTFTEHKPAVSTDYSTFSKLLPSYDGSSRTLVFYIDSENVDNALNLIANSEDPNITF 536
           ++D    +  P +ST  ST S LL S   S  + VF  DS   DN+LN   N  +   + 
Sbjct: 128 ESDLVLIQSSP-ISTRTSTTSSLLKSKSTSKPSTVFTTDSTTKDNSLN-GKNKHEQEKSV 185

Query: 537 LIRNKLSDK 563
           +I  K S K
Sbjct: 186 VINRKSSSK 194


>UniRef50_Q97KD0 Cluster: General secretion family related protein;
           n=1; Clostridium acetobutylicum|Rep: General secretion
           family related protein - Clostridium acetobutylicum
          Length = 125

 Score = 32.7 bits (71), Expect = 6.5
 Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +3

Query: 444 SSRTLVFYIDSENVDNALNLIANSEDPNITFLIRNKLS-DKVVDAL 578
           S+RTL   ID+ N DN+ N I NS D N   LI + +  DKV D L
Sbjct: 48  SARTLSHAIDAYNADNSDNTI-NSYDTNAQTLIGDDIKPDKVPDCL 92


>UniRef50_Q3JAZ6 Cluster: Putative uncharacterized protein; n=1;
           Nitrosococcus oceani ATCC 19707|Rep: Putative
           uncharacterized protein - Nitrosococcus oceani (strain
           ATCC 19707 / NCIMB 11848)
          Length = 474

 Score = 32.7 bits (71), Expect = 6.5
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = -1

Query: 449 AATVVAW*QFRERGIIGRHRWFMLSKGFIILSPFLI 342
           AA + AW   R  GI   + WF+L+  + +LSPFLI
Sbjct: 55  AAIMTAW---RRGGIYSPYYWFVLAAAYPLLSPFLI 87


>UniRef50_Q5AWQ8 Cluster: Putative uncharacterized protein; n=1;
           Emericella nidulans|Rep: Putative uncharacterized
           protein - Emericella nidulans (Aspergillus nidulans)
          Length = 566

 Score = 32.7 bits (71), Expect = 6.5
 Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
 Frame = -2

Query: 451 LLLPS*LGNSLENV-E*SVDTAGLCSV-KVLSF*VPFLSQLLYFINSVYK*RIKRIR 287
           ++LP    N + N+ E S++T  +C + K L+  +PFL  +L+FI S Y    +++R
Sbjct: 257 MMLPIYAVNCITNIMEVSINTLIICIIGKYLAVTIPFLGLVLFFIQSYYLQTSRQVR 313


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 443,427,197
Number of Sequences: 1657284
Number of extensions: 7179548
Number of successful extensions: 15580
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15579
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)