Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8d24
         (581 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487535-1|AAL93296.1|  494|Anopheles gambiae cytochrome P450 CY...    23   5.5  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   7.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   7.2  
AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450 CY...    23   7.2  

>AF487535-1|AAL93296.1|  494|Anopheles gambiae cytochrome P450
           CYP6Z1 protein.
          Length = 494

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 2/22 (9%)
 Frame = +1

Query: 343 IRKGLRMIKPLL--SINQRCLP 402
           IRKG +MI PLL  S+N++  P
Sbjct: 385 IRKGTQMIIPLLGISMNEKYFP 406


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 360  NDKTFTEHKPAVSTDYSTFSKLLPSYDGS 446
            ND+   +  PA      TFS+ +P + G+
Sbjct: 1838 NDRLVLQLPPAYHEQADTFSRTIPFFGGN 1866


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 360  NDKTFTEHKPAVSTDYSTFSKLLPSYDGS 446
            ND+   +  PA      TFS+ +P + G+
Sbjct: 1839 NDRLVLQLPPAYHEQADTFSRTIPFFGGN 1867


>AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450
           CYP6Z2 protein protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 2/22 (9%)
 Frame = +1

Query: 343 IRKGLRMIKPLLSI--NQRCLP 402
           IRKG ++I PLLSI  N++  P
Sbjct: 385 IRKGTQVIIPLLSISMNEKYFP 406


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 460,037
Number of Sequences: 2352
Number of extensions: 7457
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)