Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8d22
(572 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28263| Best HMM Match : Peptidase_M14 (HMM E-Value=0) 35 0.054
SB_26695| Best HMM Match : Peptidase_M14 (HMM E-Value=0) 34 0.072
SB_49100| Best HMM Match : Peptidase_M14 (HMM E-Value=0) 31 0.67
SB_34368| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_28995| Best HMM Match : LicD (HMM E-Value=0.018) 29 2.7
SB_40581| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_14519| Best HMM Match : Ank (HMM E-Value=1.9e-17) 28 4.7
SB_5878| Best HMM Match : Tyrosinase (HMM E-Value=0.33) 28 6.2
SB_5376| Best HMM Match : EGF_CA (HMM E-Value=0) 28 6.2
SB_20752| Best HMM Match : hATC (HMM E-Value=0.04) 27 8.2
>SB_28263| Best HMM Match : Peptidase_M14 (HMM E-Value=0)
Length = 1258
Score = 34.7 bits (76), Expect = 0.054
Identities = 17/59 (28%), Positives = 34/59 (57%)
Frame = +2
Query: 365 SKNNRKPNYCEMDWHNYHRLHVIYAFMENLSHEYPYLCSVAVIGKSAEGRDIKILKVSN 541
+K++++ E HNY +F++ L ++P + + IGKS EGRD+ ++ +S+
Sbjct: 620 TKSSKRTLSDEFKHHNYDET---LSFLKELHGQFPNITRLYSIGKSVEGRDLWVIALSS 675
>SB_26695| Best HMM Match : Peptidase_M14 (HMM E-Value=0)
Length = 441
Score = 34.3 bits (75), Expect = 0.072
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 413 YHRLHVIYAFMENLSHEYPYLCSVAVIGKSAEGRDIKILKVSN 541
+H + +E + EYP + + +GK+ E RD+ +L++S+
Sbjct: 33 HHNYEAMKGLLEKFNKEYPDITRLYSVGKTVENRDLLVLEISD 75
>SB_49100| Best HMM Match : Peptidase_M14 (HMM E-Value=0)
Length = 313
Score = 31.1 bits (67), Expect = 0.67
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Frame = +2
Query: 236 MDIMVDGPRITQIAGMLHEREIPYSIAIGDVGSVLSREQGIKYSKNNRKPNYCEMDWHNY 415
+DI V + +L ++ + I + D S+L++E K + + + D Y
Sbjct: 4 VDIHVSPDKRQAFEELLEASDMEFKIVVQDFSSMLAQE------KVSARSGGFDSD---Y 54
Query: 416 HRLHVIYAFMENLSHEYPYLCSVAVIGKSAEGRD---IKILKVSNGN 547
H L I+A + L+ Y + S +GKS E RD IKIL+ + +
Sbjct: 55 HSLSEIHAEILALAKAYSSVASNFSLGKSYENRDQLAIKILETGDSD 101
>SB_34368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 30.3 bits (65), Expect = 1.2
Identities = 26/127 (20%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Frame = +2
Query: 173 RFVKSLDTHGAITIWKEENST---MDIMVDGPRITQIAGMLHEREIPYSIAIGDVGSVLS 343
R ++ L++ W + +DIM+ ++ + ++ IP+++ I DV ++
Sbjct: 35 RVIRDLESTDKFDFWTHVSHVGKPVDIMIPEKDFNTVSRQMSDKGIPFTVNIPDVHKLVE 94
Query: 344 REQGIKYSKNNRKPNYCEMDWHNYHRLHVIYAFMENLSHEYPYLCSVAVIG--KSAEGRD 517
+ + + R ++ D Y+RL I +++L +Y V IG ++ +GR
Sbjct: 95 Q---FESRRVKRAASFSHTD---YNRLSEINDKLKSLESKYGN-AQVLTIGRRRTYQGRY 147
Query: 518 IKILKVS 538
++ +KV+
Sbjct: 148 LRAIKVA 154
>SB_28995| Best HMM Match : LicD (HMM E-Value=0.018)
Length = 1164
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +2
Query: 215 WKEENSTMDIMVDGPRITQIAGMLHEREIPYSIAIGDVGSVLSREQGIKYSKNNRKP 385
W NS M + PR+T + ++R +++ DV R GIK N P
Sbjct: 492 WNVANSDMKRLAPRPRVTVRSDQTYKRNANIELSVVDVTGHGERGTGIKAHNNANVP 548
>SB_40581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 34
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 431 IYAFMENLSHEYPYLCSVAVIGKSAEGRDIKILK 532
IY M+NL ++ L ++ +G + EGR +K +K
Sbjct: 1 IYTEMDNLVRQHSQLATMQNLGNTYEGRPMKAVK 34
>SB_14519| Best HMM Match : Ank (HMM E-Value=1.9e-17)
Length = 169
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +2
Query: 275 AGMLHEREIPYSIAIGDVGSVLSREQGIKYSKNNRKPNYCEMDWHNYHRLH 427
+G LHE + A+GD G + E G K+ N + DW N LH
Sbjct: 3 SGQLHELFLHEVCALGDAGKL--EELGSFVRKSKLDVNIRDEDWKNKTALH 51
>SB_5878| Best HMM Match : Tyrosinase (HMM E-Value=0.33)
Length = 292
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -2
Query: 331 PNIANCYRIRYLPFVKHTGYLCDSRSIHHYIHCAI 227
PN R LP + T + R HH++ CAI
Sbjct: 179 PNKVTVQRALQLPHKRFTDFEKQLRIFHHFVRCAI 213
>SB_5376| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1705
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +2
Query: 386 NYCEMDWHNYHRLHVIYAFMENLSHEYPYLCSVAVIGKSAEGRDI 520
N C +DWHN H + N+ + CSV G DI
Sbjct: 144 NECVLDWHNCHS----DGYCINIPSTFTCACSVGYTGNGTNCTDI 184
>SB_20752| Best HMM Match : hATC (HMM E-Value=0.04)
Length = 578
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -2
Query: 364 IFNPLFPTQYRPNIANCYRIRYLPFVKH 281
+FNP + YRPN A+ ++ +PF+ +
Sbjct: 456 LFNPKYVKVYRPNAADINQLDEVPFLNN 483
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,296,010
Number of Sequences: 59808
Number of extensions: 348602
Number of successful extensions: 725
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1361520496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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