Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8d21
         (556 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74046-1|CAA98556.2|  178|Caenorhabditis elegans Hypothetical pr...    33   0.14 
Z75711-5|CAB00036.1|  423|Caenorhabditis elegans Hypothetical pr...    32   0.32 
U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450...    32   0.32 
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote...    31   0.56 
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    31   0.56 
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    31   0.56 
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z27079-12|CAD44154.1|   92|Caenorhabditis elegans Hypothetical p...    28   3.9  
Z72517-5|CAA96693.1|  545|Caenorhabditis elegans Hypothetical pr...    28   5.2  
AL132876-21|CAD21671.1|  418|Caenorhabditis elegans Hypothetical...    27   6.9  
AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical ...    27   6.9  
AF016687-3|AAC48090.1|  375|Caenorhabditis elegans Paralysed arr...    27   6.9  

>Z74046-1|CAA98556.2|  178|Caenorhabditis elegans Hypothetical
           protein ZC116.1 protein.
          Length = 178

 Score = 33.1 bits (72), Expect = 0.14
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +1

Query: 46  LVLCGLLAAVSAAPQYYHGSSHWPYHHYDP 135
           L LC LLA  SA   YY  S + PY++Y P
Sbjct: 5   LALCSLLAVASAQYLYYPTSYYTPYYYYYP 34


>Z75711-5|CAB00036.1|  423|Caenorhabditis elegans Hypothetical
           protein K02B12.7 protein.
          Length = 423

 Score = 31.9 bits (69), Expect = 0.32
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +1

Query: 367 ANSAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLK-QKQPEDSKRPVAEPTETTSTN 543
           + + FN +LK  NLP    +EG      + LK T P++ +K+ E S +PV    + T+ N
Sbjct: 310 SQNEFNDWLKQSNLPRG-TTEGGDHLSNEELKPTEPVETKKKKERSVKPVQSKEKVTAEN 368

Query: 544 V 546
           V
Sbjct: 369 V 369


>U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450
           family protein 14A5 protein.
          Length = 492

 Score = 31.9 bits (69), Expect = 0.32
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = -1

Query: 487 AFASAGR*FSTRLSRKPSCLRNSHPREGSVFSSND 383
           AF + G  F  R  R P  L   HP  G VFSS D
Sbjct: 82  AFVTQGDAFVNRAQRLPEILFQPHPNTGVVFSSGD 116


>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
            protein.
          Length = 10578

 Score = 31.1 bits (67), Expect = 0.56
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +1

Query: 424  SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 555
            +E S   + DV KI  PL+Q Q +     VA P+E T  +V +E
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3410



 Score = 30.3 bits (65), Expect = 0.97
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 445  EKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 555
            + DV K+  PL+Q Q +     VA P+E T  +V +E
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3484


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
            protein.
          Length = 18519

 Score = 31.1 bits (67), Expect = 0.56
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +1

Query: 424  SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 555
            +E S   + DV KI  PL+Q Q +     VA P+E T  +V +E
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3410



 Score = 30.3 bits (65), Expect = 0.97
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 445  EKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 555
            + DV K+  PL+Q Q +     VA P+E T  +V +E
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3484


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
            protein.
          Length = 18534

 Score = 31.1 bits (67), Expect = 0.56
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +1

Query: 424  SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 555
            +E S   + DV KI  PL+Q Q +     VA P+E T  +V +E
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3410



 Score = 30.3 bits (65), Expect = 0.97
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 445  EKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 555
            + DV K+  PL+Q Q +     VA P+E T  +V +E
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3484


>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
           protein F35A5.1 protein.
          Length = 1274

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 475 LKQKQPEDSKRPVAEPTETTSTNVSRE 555
           LK+K+P  S +PV++P+ T    V +E
Sbjct: 239 LKKKEPSTSVKPVSDPSPTKKVPVKKE 265


>Z27079-12|CAD44154.1|   92|Caenorhabditis elegans Hypothetical
           protein T05G5.12 protein.
          Length = 92

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = +1

Query: 373 SAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVS 549
           S F  Y K+++   D   + ++ Y+K     T P+ QK  + S    A    T ST  S
Sbjct: 5   SQFTAYKKVESDEQDSEKQNTFNYQKLSESETMPVHQKTRKGSNHSNASTASTCSTTSS 63


>Z72517-5|CAA96693.1|  545|Caenorhabditis elegans Hypothetical
           protein T28F4.2 protein.
          Length = 545

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 539 VEVVSVGSATGLLLSSGCFCFSGKVI 462
           + V+SV   TGL+L  G FC +G  I
Sbjct: 463 LSVISVVEMTGLMLVMGAFCVTGGAI 488


>AL132876-21|CAD21671.1|  418|Caenorhabditis elegans Hypothetical
           protein Y105E8A.25 protein.
          Length = 418

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 64  LAAVSAAPQYYHGSSHWPYHHYDPFSPYV 150
           L A+S   ++   S H PY+HY P S  V
Sbjct: 181 LPAISEESEHEQQSIHIPYNHYPPHSSSV 209


>AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical
           protein Y39G8C.1 protein.
          Length = 1195

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
 Frame = +1

Query: 91  YYHGSSHWPY---HHYDPFSPYVR 153
           YYHG   W +   HHY PF   VR
Sbjct: 532 YYHGCVSWSWFYPHHYAPFISDVR 555


>AF016687-3|AAC48090.1|  375|Caenorhabditis elegans Paralysed arrest
           at two-fold protein6 protein.
          Length = 375

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +3

Query: 237 VEVPQHYKRRTRGRRQVSDIYSPAWLRTERHQRESEKWSAD 359
           +EVP+   +   G+RQ   I      R     RE EKWSAD
Sbjct: 145 IEVPE-VSQSEEGQRQKLQIVVQTANRILGQPREQEKWSAD 184


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.315    0.130    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,690,205
Number of Sequences: 27780
Number of extensions: 260918
Number of successful extensions: 819
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)