Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8d19
         (669 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RKY1 Cluster: Axonemal heavy chain dynein type 3; n=8...    34   3.6  
UniRef50_O32270 Cluster: Teichuronic acid biosynthesis protein t...    33   4.7  
UniRef50_Q755T3 Cluster: AER435Wp; n=1; Eremothecium gossypii|Re...    33   8.2  

>UniRef50_Q7RKY1 Cluster: Axonemal heavy chain dynein type 3; n=8;
            cellular organisms|Rep: Axonemal heavy chain dynein type
            3 - Plasmodium yoelii yoelii
          Length = 3690

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
 Frame = +1

Query: 352  NINTYLGNFNRICKYFL-----CFNLQVKFALLVRI*VRKIVYRLSRADPTMISIMS*QN 516
            NI+ Y  N N I  Y+L     C NL   + + V       V++ S  + +  S  S   
Sbjct: 1396 NIDNYYENINSIYDYYLKVYKKCKNLYKNYDINVDNETNNTVFQKSYGNYSSDSNSSNDG 1455

Query: 517  FFLK*KGQWHLIKLPQNYYSRRCT**IYNVGIYTNVLQ-PKFHTIS*DK 660
             +LK K   +L KL   Y        IYNV  Y ++    + H IS D+
Sbjct: 1456 RYLKRKKSRNLKKLENKYDPENVDDIIYNVNYYNDIYNLTQNHQISKDE 1504


>UniRef50_O32270 Cluster: Teichuronic acid biosynthesis protein
           tuaE; n=2; Bacillus|Rep: Teichuronic acid biosynthesis
           protein tuaE - Bacillus subtilis
          Length = 488

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = -3

Query: 664 LFYLMIWYGIWVEERSYICPRYIFITCTYENNSSVVI*LNAIGLFILKKSFVTTLC 497
           LF L +      +ER ++   YI I CT+ NN+   I L    LF+ +   +   C
Sbjct: 48  LFLLTLATAFTTKERLFMAVIYILIACTFLNNAFFAIHLGFFSLFLYRLLLIAAGC 103


>UniRef50_Q755T3 Cluster: AER435Wp; n=1; Eremothecium gossypii|Rep:
           AER435Wp - Ashbya gossypii (Yeast) (Eremothecium
           gossypii)
          Length = 727

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 153 RNGCPTALWICGSEINQSLKLLVENLLTSSIDLPAGEPEMFSYKNTQIKN 302
           +N  PT LW     + +  K ++ N LT+ +D   G P M ++KN   +N
Sbjct: 677 KNRAPTTLWTLCDVLTRDTKSVL-NTLTNMMDRLVGSPLMANFKNKPYRN 725


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 628,526,882
Number of Sequences: 1657284
Number of extensions: 12126901
Number of successful extensions: 26736
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26731
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)