Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8d19
         (669 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_43930| Best HMM Match : ANF_receptor (HMM E-Value=0)                29   4.5  
SB_15119| Best HMM Match : BAP (HMM E-Value=3.5)                       29   4.5  
SB_46562| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.9  

>SB_43930| Best HMM Match : ANF_receptor (HMM E-Value=0)
          Length = 915

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -2

Query: 539 WPFYFKKKFCYDIMLIMVGSALLKR*TIFRTQI-LTSKANLTCKLKHKKYLQILLKFP 369
           WPF F   FC    ++++ +  L R  +FR +  LTS++NL            L  FP
Sbjct: 658 WPFVFAVVFCLGTSIMLLKTDRLLR--VFRAKARLTSRSNLLTNKMQFLTASALTSFP 713


>SB_15119| Best HMM Match : BAP (HMM E-Value=3.5)
          Length = 418

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +2

Query: 557 YHRTIILVGAR-NKYITWAYIRTFFN 631
           Y  T+   G R NKY TWAY R ++N
Sbjct: 179 YMDTLYKQGIRYNKYATWAYERIYYN 204


>SB_46562| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 280

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 142 IPWRMRCFYLNFP 104
           +PWR+ C+ +NFP
Sbjct: 213 LPWRLECYLINFP 225


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,150,348
Number of Sequences: 59808
Number of extensions: 371703
Number of successful extensions: 659
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1729817375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)